RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 Q6ZR54 194 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 SHFQ7M4L6 423 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 CYP4Z1Q86W10 505 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 Q8IYB0 196 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 STPG3Q8N7X2 389 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 SLC37A3Q8NCC5 494 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 MNS1Q8NEH6 495 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 UBALD1Q8TB05 177 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 THEM6Q8WUY1 208 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 TEAD3Q99594 435 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 PPIL3Q9H2H8 161 aaKnown RBP7.8□□□□□ -1.16
CSDE1-215ENST00000533818 EXOSC4Q9NPD3 245 aaKnown RBP7.8□□□□□ -1.16
CSDE1-215ENST00000533818 RBFOX1Q9NWB1 397 aaKnown RBP7.8□□□□□ -1.16
CSDE1-215ENST00000533818 NUBP2Q9Y5Y2 271 aa7.8□□□□□ -1.16
CSDE1-215ENST00000533818 DNAH5Q8TE73 4624 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 IGHV4-4A0A075B6R2 117 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 TRBV4-1A0A0J9YWV2 114 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 TMEM120BA0PK00 339 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 A6NIN4 97 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 LGALS9O00182 355 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 ANGPT2O15123 496 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 AIREO43918 545 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 IL1AP01583 271 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 CLUP10909 449 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 PRKACAP17612 351 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 SPI1P17947 270 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 C21orf33P30042 268 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-215ENST00000533818 NDPQ00604 133 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 TNP2Q05952 138 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 SCN1BQ07699 218 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 IFFO1Q0D2I5 559 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 C5orf64Q2M2E5 130 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 SPIN3Q5JUX0 258 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 EPGNQ6UW88 154 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 OR52B4Q8NGK2 314 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 OR52J3Q8NH60 311 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 ABHD5Q8WTS1 349 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 LINC00574Q9H8X3 128 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 ZC4H2Q9NQZ6 224 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 RNF150Q9ULK6 438 aa7.79□□□□□ -1.16
CSDE1-215ENST00000533818 A0A0G2JLM5 398 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 TRBV2A0A0J9YWF9 115 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ACOD1A6NK06 481 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 DHRS3O75911 302 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 CSN2P05814 226 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 LYNP07948 512 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 IL3RAP26951 378 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ALDH3A2P51648 485 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ACTBP60709 375 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ATXN7L3Q14CW9 347 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-215ENST00000533818 RPEL1Q2QD12 228 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 IFI44LQ53G44 452 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ZNF660Q6AZW8 331 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-215ENST00000533818 PVRIGQ6DKI7 326 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 CD200R1LQ6Q8B3 271 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 UNQ5815/PRO19632Q6UWF5 114 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 FKBP9P1Q75LS8 142 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 NR2C2APQ86WQ0 139 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 SYT8Q8NBV8 401 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 OR13A1Q8NGR1 328 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 RITA1Q96K30 269 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 SH3GL1Q99961 368 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 ZNF251Q9BRH9 671 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 PEF1Q9UBV8 284 aaKnown RBP7.78□□□□□ -1.16
CSDE1-215ENST00000533818 GSTK1Q9Y2Q3 226 aa7.78□□□□□ -1.16
CSDE1-215ENST00000533818 IGKV1-27A0A075B6S5 117 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 MEIKINA0A087WXM9 373 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 TMEM269A0A1B0GVZ9 245 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 NPIPB11E5RHQ5 1161 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 ZNF682O95780 498 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 IGLV3-1P01715 115 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 EGR2P11161 476 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-215ENST00000533818 BCL3P20749 454 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 GSTT1P30711 240 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 CX3CL1P78423 397 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 CRMP1Q14194 572 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 LINC01590Q5TEZ4 76 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 PPP1R27Q86WC6 154 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 SLC15A3Q8IY34 581 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 DNAAF1Q8NEP3 725 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 OR10A7Q8NGE5 316 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 ZNF503Q96F45 646 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 NMNAT2Q9BZQ4 307 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 PBOV1Q9GZY1 135 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 ENPP4Q9Y6X5 453 aa7.77□□□□□ -1.17
CSDE1-215ENST00000533818 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 KIR2DL5BA0A0G2JN68 375 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 KIR2DL5BA0A0G2JPC4 375 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 NBR2O15453 112 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 TXNL1O43396 289 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 TRBV12-3P01733 135 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 CSTBP04080 98 aaKnown RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 ZNF44P15621 663 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 VHLP40337 213 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 IDH3AP50213 366 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 CYLC2Q14093 348 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-215ENST00000533818 ANKRD55Q3KP44 614 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 AKIRIN2Q53H80 203 aa7.76□□□□□ -1.17
CSDE1-215ENST00000533818 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms