RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, human

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-222	ENST00000533733	RAC2	P15153	192 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	ADCYAP1	P18509	176 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	RCC1	P18754	421 aa	Predicted RBP	10.21	□□□□□ -0.77
ATM-222	ENST00000533733	LPAR6	P43657	344 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	UBE2N	P61088	152 aa	Known RBP	10.21	□□□□□ -0.77
ATM-222	ENST00000533733	FLI1	Q01543	452 aa	Predicted RBP	10.21	□□□□□ -0.77
ATM-222	ENST00000533733	PEA15	Q15121	130 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	MEX3B	Q6ZN04	569 aa	Known RBP	10.21	□□□□□ -0.77
ATM-222	ENST00000533733	MDP1	Q86V88	176 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	FAM219A	Q8IW50	185 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.21	□□□□□ -0.77
ATM-222	ENST00000533733	DMBX1	Q8NFW5	382 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	OR10J5	Q8NHC4	309 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733	CDH20	Q9HBT6	801 aa		10.21	□□□□□ -0.77
ATM-222	ENST00000533733		A0A1B0GW64	132 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	ARGFX	A6NJG6	315 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	TSPAN15	O95858	294 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	SCT	P09683	121 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	ZNF14	P17017	642 aa	Predicted RBP	10.21	□□□□□ -0.78
ATM-222	ENST00000533733	CD200	P41217	278 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	TNFSF10	P50591	281 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	VAMP2	P63027	116 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	PDCD1	Q15116	288 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	TRIP6	Q15654	476 aa	Known RBP	10.21	□□□□□ -0.78
ATM-222	ENST00000533733	HIKESHI	Q53FT3	197 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	SMUG1	Q53HV7	270 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	NMS	Q5H8A3	153 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	ZNF818P	Q6ZRF7	136 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	GAPT	Q8N292	157 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	OR52M1	Q8NGK5	317 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	ERGIC1	Q969X5	290 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	PBDC1	Q9BVG4	233 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	DEFB127	Q9H1M4	99 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	C12orf49	Q9H741	205 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	LYRM2	Q9NU23	88 aa	Predicted RBP	10.21	□□□□□ -0.78
ATM-222	ENST00000533733	SPRR3	Q9UBC9	169 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	CLCF1	Q9UBD9	225 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	LIPG	Q9Y5X9	500 aa		10.21	□□□□□ -0.78
ATM-222	ENST00000533733	ESPL1	Q14674	2120 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	MED12L	Q86YW9	2145 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733		A0A1B0GU03	582 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	BTBD17	A6NE02	478 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	IQCF6	A8MYZ5	107 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733		H7C2Y5	167 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	MUC1	P15941	1255 aa	Predicted RBP	10.2	□□□□□ -0.78
ATM-222	ENST00000533733	F2R	P25116	425 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
ATM-222	ENST00000533733	ID3	Q02535	119 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	HERPUD1	Q15011	391 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	PCSK4	Q6UW60	755 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.2	□□□□□ -0.78
ATM-222	ENST00000533733	LILRB1	Q8NHL6	650 aa	Predicted RBP	10.2	□□□□□ -0.78
ATM-222	ENST00000533733	USB1	Q9BQ65	265 aa	Known RBP	10.2	□□□□□ -0.78
ATM-222	ENST00000533733	DLL3	Q9NYJ7	618 aa		10.2	□□□□□ -0.78
ATM-222	ENST00000533733	TRAV24	A0A0B4J272	114 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	NKX2-6	A6NCS4	301 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	CDRT15L2	A8MXV6	281 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	SMPD2	O60906	423 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	PAX6	P26367	422 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	SNCA	P37840	140 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	CAMLG	P49069	296 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	ERVK11-1	P61568	191 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	PPP1CB	P62140	327 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	ZNF146	Q15072	292 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	TGIF1	Q15583	401 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	ZNF324B	Q6AW86	544 aa	Predicted RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	OR2T2	Q6IF00	324 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733		Q6P435	159 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	IGF2-AS	Q6U949	168 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	IGFL2	Q6UWQ7	119 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733		Q6ZT83	130 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	PIP4P1	Q86T03	277 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	BOLL	Q8N9W6	283 aa	Known RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	LSM10	Q969L4	123 aa	Known RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	SMIM3	Q9BZL3	60 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	TLNRD1	Q9H1K6	362 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	CRIM1	Q9NZV1	1036 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	CACFD1	Q9UGQ2	172 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	KNTC1	P50748	2209 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	FAM74A7	A6NL05	159 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	RNF212B	A8MTL3	300 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	WRB	O00258	174 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	AQP7	O14520	342 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	PGLYRP1	O75594	196 aa	Predicted RBP	10.19	□□□□□ -0.78
ATM-222	ENST00000533733	SFTA3	P0C7M3	94 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	PGA5	P0DJD9	388 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	ZNF44	P15621	663 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	CA6	P23280	308 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	HOXC12	P31275	282 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	TSC22D1	Q15714	1073 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	C3AR1	Q16581	482 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	GUCA2B	Q16661	112 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	FAM74A3	Q4VXF1	159 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	DPPA3	Q6W0C5	159 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	FAM214B	Q7L5A3	538 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	ZBTB34	Q8NCN2	500 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	OR10V1	Q8NGI7	309 aa		10.19	□□□□□ -0.78
ATM-222	ENST00000533733	HIPK2	Q9H2X6	1198 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms