RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ZNF429Q86V71 674 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 IZUMO1Q8IYV9 350 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 RDH10Q8IZV5 341 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 OR11H1Q8NG94 326 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 OR8H1Q8NGG4 311 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 RNFT2Q96EX2 444 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
CMTM1-216ENST00000533078 THTPAQ9BU02 230 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 OSBPL10Q9BXB5 764 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 NCOR1P1Q9H4R4 102 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 SCOCQ9UIL1 159 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
CMTM1-216ENST00000533078 IGHV1-3A0A0C4DH29 117 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 LCE6AA0A183 80 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 FKBP6O75344 327 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 IGHG4P01861 327 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 ISG15P05161 165 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 RPSAP08865 295 aaKnown RBP9.05□□□□□ -0.96
CMTM1-216ENST00000533078 SOX6P35712 828 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 DAPP51397 102 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 TMED1Q13445 227 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 TP53I3Q53FA7 332 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 Q6P435 159 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 FAHD1Q6P587 224 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 KCTD20Q7Z5Y7 419 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 OR13A1Q8NGR1 328 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 OR13C9Q8NGT0 318 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 OR2G2Q8NGZ5 317 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 RFESDQ8TAC1 157 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 MRGPRDQ8TDS7 321 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 UTP4Q969X6 686 aaKnown RBP9.05□□□□□ -0.96
CMTM1-216ENST00000533078 MRPL48Q96GC5 212 aaKnown RBP9.05□□□□□ -0.96
CMTM1-216ENST00000533078 SPACA5Q96QH8 159 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 NR1H4Q96RI1 486 aaPredicted RBP9.05□□□□□ -0.96
CMTM1-216ENST00000533078 MBOAT4Q96T53 435 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
CMTM1-216ENST00000533078 GHITMQ9H3K2 345 aa9.05□□□□□ -0.96
CMTM1-216ENST00000533078 CSMD3Q7Z407 3707 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 ZAR1LA6NP61 321 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 MAGEB3O15480 346 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 TXNL1O43396 289 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 MOSP00540 346 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 HTR1AP08908 422 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 GZMHP20718 246 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 KIR3DL2P43630 455 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 REG1BP48304 166 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 GNGT1P63211 74 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 ZNF616Q08AN1 781 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 FHL3Q13643 280 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 EBI3Q14213 229 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 DIAPH2-AS1Q14236 149 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 C12orf73Q69YU5 71 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 ISOC1Q96CN7 298 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 S1PR3Q99500 378 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 GPER1Q99527 375 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 CHCHD6Q9BRQ6 235 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 ZCCHC4Q9H5U6 513 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 LINC00574Q9H8X3 128 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 ISYNA1Q9NPH2 558 aa9.04□□□□□ -0.96
CMTM1-216ENST00000533078 A0A1W2PPE3 182 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 LINC01548A6NM66 108 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 NPIPB11E5RHQ5 1161 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 G3V2T6 193 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 SAP30O75446 220 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 CD1BP29016 333 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 SSTR5P35346 364 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 ZP1P60852 638 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 ISL1P61371 349 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 GABPB1Q06547 395 aaPredicted RBP9.03□□□□□ -0.96
CMTM1-216ENST00000533078 IL13RA2Q14627 380 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 CDK5R1Q15078 307 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 KISS1Q15726 138 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 OVCH2Q7RTZ1 564 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 ZDHHC13Q8IUH4 622 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 Q8N9W7 124 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 OR5D14Q8NGL3 314 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 OR6Q1Q8NGQ2 317 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 OR1N2Q8NGR9 330 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 CNIH3Q8TBE1 160 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 KCTD7Q96MP8 289 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 RAB9BQ9NP90 201 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 VSIG4Q9Y279 399 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 MYRFQ9Y2G1 1151 aa9.03□□□□□ -0.96
CMTM1-216ENST00000533078 DAPL1A0PJW8 107 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 SDCBPO00560 298 aaPredicted RBP9.02□□□□□ -0.97
CMTM1-216ENST00000533078 OVOL1O14753 267 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 SULT1B1O43704 296 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 CGB3P0DN86 165 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 CGB7P0DN87 165 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 PSMB8P28062 276 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 CCR9P51686 369 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 EFNB1P98172 346 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 PAX5Q02548 391 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 RSU1Q15404 277 aa9.02□□□□□ -0.97
CMTM1-216ENST00000533078 UTF1Q5T230 341 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms