RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 EGLN1Q9GZT9 426 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 ISG20L2Q9H9L3 353 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 ELOVL3Q9HB03 270 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 SPAG4Q9NPE6 437 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 GFOD1Q9NXC2 390 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 TIMM8AO60220 97 aaPredicted RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 TPM3P06753 285 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 GRPP07492 148 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 CTSGP08311 255 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 HTR1DP28221 377 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 SLC7A2P52569 658 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 RIDAP52758 137 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 RPS27AP62979 156 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.14□□□□□ -2.23
KNL1-211ENST00000533001 PNLIPRP3Q17RR3 467 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 COMMD1Q8N668 190 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 OR9G4Q8NGQ1 327 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 OR51E1Q8TCB6 317 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 PHLDA1Q8WV24 401 aaPredicted RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 Q96M66 194 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 FAM103A1Q9BTL3 118 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 RABEP2Q9H5N1 569 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 KIF25Q9UIL4 384 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 ANAPC10Q9UM13 185 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 POFUT2Q9Y2G5 429 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 MED31Q9Y3C7 131 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 IGHV3-72A0A0B4J1Y9 119 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 PSMB11A5LHX3 300 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 LOC110117498-PIK3R3F6TDL0 507 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 MRPS12O15235 138 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 MITFO75030 526 aaPredicted RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 IGKV1-17P01599 117 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 ERCC1P07992 297 aaPredicted RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 AREGP15514 252 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 SLC6A6P31641 620 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 SRP9P49458 86 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 DEFB1P60022 68 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 TRAM2Q15035 370 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 FAM27D1Q5T7N8 215 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 LCE5AQ5TCM9 118 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 TEX38Q6PEX7 206 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 SHQ1Q6PI26 577 aaKnown RBP1.14□□□□□ -2.23
KNL1-211ENST00000533001 Q6ZS49 121 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 LYG2Q86SG7 212 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 LAX1Q8IWV1 398 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 OR4D6Q8NGJ1 314 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 OR5L1Q8NGL2 311 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 ZNF570Q96NI8 536 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 APOL4Q9BPW4 351 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 PBOV1Q9GZY1 135 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 VSIRQ9H7M9 311 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 FN3KRPQ9HA64 309 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 CALYQ9NYX4 217 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 CEPT1Q9Y6K0 416 aa1.14□□□□□ -2.23
KNL1-211ENST00000533001 IQCMA0A1B0GVH7 501 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 MFSD2BA6NFX1 497 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 FADS2O95864 444 aaKnown RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 CALCBP10092 127 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 HPGDP15428 266 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 CBLN1P23435 193 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 CX3CR1P49238 355 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 CDC42P60953 191 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 LIPEQ05469 1076 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 ZNF585BQ52M93 769 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 AGKQ53H12 422 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 GDF5OSQ5U4N7 250 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 LCN1P1Q5VSP4 162 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 Q6ZTK2 550 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 TRPT1Q86TN4 253 aaKnown RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 SAXO1Q8IYX7 474 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 TEX29Q8N6K0 151 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 OR10A7Q8NGE5 316 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 OR1L1Q8NH94 360 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 IL22RA2Q969J5 263 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 KCTD14Q9BQ13 255 aaPredicted RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 SULT4A1Q9BR01 284 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 SLC22A4Q9H015 551 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 FNDC4Q9H6D8 234 aaPredicted RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 CDH20Q9HBT6 801 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 FIS1Q9Y3D6 152 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 ANGPTL3Q9Y5C1 460 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 SAA2-SAA4A0A096LPE2 208 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 IGKV1D-13A0A0B4J2D9 117 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 NUDT19A8MXV4 375 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 GOLGA6L6A8MZA4 724 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 PSMD9O00233 223 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 SERPINI2O75830 405 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 IGKV1D-33P01593 117 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 IGKV1-33P01594 117 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 UQCRHP07919 91 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 SAA2P0DJI9 122 aaPredicted RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 IGKV1-13P0DP09 117 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 CCR9P51686 369 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 NANOS2P60321 138 aaKnown RBP1.13□□□□□ -2.23
KNL1-211ENST00000533001 ACTBP60709 375 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 CD47Q08722 323 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 LINC01559Q495D7 138 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 C9orf66Q5T8R8 295 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 BTNL3Q6UXE8 466 aa1.13□□□□□ -2.23
KNL1-211ENST00000533001 ASRGL1Q7L266 308 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms