RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 SCGB2A2Q13296 93 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 RBM39Q14498 530 aaKnown RBP20.29■□□□□ 0.84
USP48-214ENST00000532737 NKAPLQ5M9Q1 402 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 SLC35E4Q6ICL7 350 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 SFXN4Q6P4A7 337 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 ZNF782Q6ZMW2 699 aaPredicted RBP20.29■□□□□ 0.84
USP48-214ENST00000532737 C9orf139Q6ZV77 190 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 FAM89BQ8N5H3 189 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 SLC6A7Q99884 636 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 URM1Q9BTM9 101 aaKnown RBP20.29■□□□□ 0.84
USP48-214ENST00000532737 OCEL1Q9H607 264 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 OR6C3Q9NZP0 311 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 DAPK2Q9UIK4 370 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 DSCAML1Q8TD84 2053 aa20.29■□□□□ 0.84
USP48-214ENST00000532737 TRAV39A0A0B4J263 110 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 TMEM30CPA0ZSE6 113 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 UBE2QL1A1L167 161 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 H3BUI4 141 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 SOCS1O15524 211 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 IFNA2P01563 188 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 RBP4P02753 201 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 GLAP06280 429 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 CGB3P0DN86 165 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 CGB7P0DN87 165 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 EFNB2P52799 333 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 TUSC1Q2TAM9 212 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 NCR3LG1Q68D85 454 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 ZNF497Q6ZNH5 498 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 OR13A1Q8NGR1 328 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 NEDD4LQ96PU5 975 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 NAA50Q9GZZ1 169 aaKnown RBP20.28■□□□□ 0.84
USP48-214ENST00000532737 TAS2R3Q9NYW6 316 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 RAB22AQ9UL26 194 aa20.28■□□□□ 0.84
USP48-214ENST00000532737 A0A1W2PRD5 423 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 A0A1W2PRF3 423 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 A0A1W2PRM7 423 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 MMP23AO75900 390 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 MT-ND4P03905 459 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 IGHV1-8P0DP01 117 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 BLVRBP30043 206 aaPredicted RBP20.27■□□□□ 0.84
USP48-214ENST00000532737 BPIFB3P59826 476 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 SLC16A12Q6ZSM3 486 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 RTN4RL2Q86UN3 420 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 PNKDQ8N490 385 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 PIP4P2Q8N4L2 257 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 DYRK2Q92630 601 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 ETAA1Q9NY74 926 aa20.27■□□□□ 0.84
USP48-214ENST00000532737 FOXI3A8MTJ6 420 aaPredicted RBP20.26■□□□□ 0.83
USP48-214ENST00000532737 RPS19P39019 145 aaKnown RBP20.26■□□□□ 0.83
USP48-214ENST00000532737 GLP1RP43220 463 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 NCS1P62166 190 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 C17orf58Q2M2W7 97 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 GPR107Q5VW38 600 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 C6orf201Q7Z4U5 140 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 GPR141Q7Z602 305 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 ANKRD13BQ86YJ7 626 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 ZNF48Q96MX3 618 aaPredicted RBP20.26■□□□□ 0.83
USP48-214ENST00000532737 SULT4A1Q9BR01 284 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 FAAP24Q9BTP7 215 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 GAL3ST2Q9H3Q3 398 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 HEXA-AS1Q9H8Q6 139 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 KIAA2026Q5HYC2 2103 aa20.26■□□□□ 0.83
USP48-214ENST00000532737 RNF212BA8MTL3 300 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 CLPXO76031 633 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 SNRPBP14678 240 aaKnown RBP20.25■□□□□ 0.83
USP48-214ENST00000532737 COX7A1P24310 79 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 GDNFP39905 211 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 VEGFCP49767 419 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 UBE2E1P51965 193 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 TMEM50BP56557 158 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 VBP1P61758 197 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 GUCA2AQ02747 115 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 PRAMEF5Q5TYX0 476 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 GAPTQ8N292 157 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 ZNF565Q8N9K5 539 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 MRGPRDQ8TDS7 321 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 CCDC107Q8WV48 283 aa20.25■□□□□ 0.83
USP48-214ENST00000532737 KBTBD11-OT1A0A1B0GTJ5 212 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 ZNF729A6NN14 1252 aaPredicted RBP20.24■□□□□ 0.83
USP48-214ENST00000532737 NPFFO15130 113 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 RAB6AP20340 208 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 OMGP23515 440 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 CDK2P24941 298 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 BAIAP2L2Q6UXY1 529 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 HEPN1Q6WQI6 88 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 SESN1Q9Y6P5 492 aa20.24■□□□□ 0.83
USP48-214ENST00000532737 MDFIC2A0A1B0GVS7 189 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 GABARAPO95166 117 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 PAHP00439 452 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 IL1AP01583 271 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 CTF1Q16619 201 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 DEFB112Q30KQ8 113 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 IDNKQ5T6J7 187 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 SIGLECL1Q8N7X8 197 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 OR56B1Q8NGI3 324 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 OR4K15Q8NH41 348 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 PTX4Q96A99 478 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 SUCNR1Q9BXA5 334 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 PLEKHJ1Q9NW61 149 aa20.23■□□□□ 0.83
USP48-214ENST00000532737 CALYQ9NYX4 217 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms