RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 KRTDAPP60985 99 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 PRDX4Q13162 271 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 LHFPL4Q7Z7J7 247 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 CORO2AQ92828 525 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 TM4SF19Q96DZ7 209 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 FAM103A1Q9BTL3 118 aaKnown RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 AQP7P3A6NL99 342 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 SEMA4FO95754 770 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 ARL6IP1Q15041 203 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 VAMP3Q15836 100 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 FAM71F1Q96KD3 344 aaPredicted RBP12.24□□□□□ -0.45
PCF11-204ENST00000530660 S1PR5Q9H228 398 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCF11-204ENST00000530660 STARD5Q9NSY2 213 aa12.24□□□□□ -0.45
PCF11-204ENST00000530660 A0A1W2PR80 420 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 OTOL1A6NHN0 477 aaPredicted RBP12.23□□□□□ -0.45
PCF11-204ENST00000530660 F2Z2F3 143 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 SH2D1BO14796 132 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 KBTBD11O94819 623 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 CEACAM5P06731 702 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 FFAR4Q5NUL3 377 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 Q5PR19 223 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 BCORP1Q8N888 145 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 ZNF519Q8TB69 540 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 GPHA2Q96T91 129 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 PXMP4Q9Y6I8 212 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 IGKV1D-43A0A0B4J1Z2 117 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 RIPPLY3P57055 190 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 SYT13Q7L8C5 426 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 VSTM2LQ96N03 204 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 P2RX4Q99571 388 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 PARLQ9H300 379 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 SERGEFQ9UGK8 458 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 ANXA10Q9UJ72 324 aa12.23□□□□□ -0.45
PCF11-204ENST00000530660 ZNF737O75373 536 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 IGLC2P0DOY2 106 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 CTRLP40313 264 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 LHX8Q68G74 356 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 ABHD12BQ7Z5M8 362 aaPredicted RBP12.22□□□□□ -0.45
PCF11-204ENST00000530660 WDFY1Q8IWB7 410 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 LRTM2Q8N967 370 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 OR5AU1Q8NGC0 362 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 OR6C1Q96RD1 312 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 UQCR10Q9UDW1 63 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 FBXL7Q9UJT9 491 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 ASCC3Q8N3C0 2202 aaKnown RBP12.22□□□□□ -0.45
PCF11-204ENST00000530660 SPEGQ15772 3267 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 CT45A8P0DMV1 189 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 CT45A9P0DMV2 189 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 DRD3P35462 400 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 SHBQ15464 509 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 CT45A2Q5DJT8 189 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 OR10G6Q8NH81 332 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 TIMM29Q9BSF4 260 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 DECR2Q9NUI1 292 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 HSPB7Q9UBY9 170 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 KNL1Q8NG31 2342 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 GDF9O60383 454 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 SERPINA7P05543 415 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 PSG1P11464 419 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 PVRP15151 417 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 ECI1P42126 302 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 WASP42768 502 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 EFNA3P52797 238 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
PCF11-204ENST00000530660 DEFB103AP81534 67 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 MRGPRGQ86SM5 289 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 FAM89BQ8N5H3 189 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 OR4B1Q8NGF8 309 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 WDYHV1Q96HA8 205 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 ZBP1Q9H171 429 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 PHPT1Q9NRX4 125 aaPredicted RBP12.22□□□□□ -0.45
PCF11-204ENST00000530660 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
PCF11-204ENST00000530660 HOXC12P31275 282 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 SAMD10Q9BYL1 202 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 SPACA6W5XKT8 324 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 DIRC3C9JPN6 131 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 AADACP22760 399 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 MEF2BQ02080 365 aaPredicted RBP12.21□□□□□ -0.45
PCF11-204ENST00000530660 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 GATAD1Q8WUU5 269 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 KCNE4Q8WWG9 221 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 PSMF1Q92530 271 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 STARD4Q96DR4 205 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 ZNF286AQ9HBT8 521 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 LYRM4Q9HD34 91 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 RYDENQ9NUL5 291 aaKnown RBP12.21□□□□□ -0.45
PCF11-204ENST00000530660 PLEKHJ1Q9NW61 149 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 TBX21Q9UL17 535 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 ST3GAL6Q9Y274 331 aa12.21□□□□□ -0.45
PCF11-204ENST00000530660 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 H0YGG7 62 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 J3QW42 95 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 CHST1O43916 411 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 GYPAP02724 150 aa12.21□□□□□ -0.46
PCF11-204ENST00000530660 ARF3P61204 181 aaPredicted RBP12.21□□□□□ -0.46
PCF11-204ENST00000530660 BRICD5Q6PL45 260 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms