RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 OR8B2Q96RD0 313 aa8.84□□□□□ -0.99
SOX6-213ENST00000530378 THAP7Q9BT49 309 aaPredicted RBP8.84□□□□□ -0.99
SOX6-213ENST00000530378 LPAR2Q9HBW0 351 aa8.84□□□□□ -0.99
SOX6-213ENST00000530378 CR1P17927 2039 aa8.83□□□□□ -1
SOX6-213ENST00000530378 TMEM30CPA0ZSE6 113 aa8.83□□□□□ -1
SOX6-213ENST00000530378 GABARAPH6UMI1 98 aa8.83□□□□□ -1
SOX6-213ENST00000530378 MGST3O14880 152 aa8.83□□□□□ -1
SOX6-213ENST00000530378 CSN2P05814 226 aa8.83□□□□□ -1
SOX6-213ENST00000530378 IL7P13232 177 aa8.83□□□□□ -1
SOX6-213ENST00000530378 HLA-DMAP28067 261 aa8.83□□□□□ -1
SOX6-213ENST00000530378 PPP5CP53041 499 aa8.83□□□□□ -1
SOX6-213ENST00000530378 PNLIPRP3Q17RR3 467 aa8.83□□□□□ -1
SOX6-213ENST00000530378 TMEM155Q4W5P6 130 aa8.83□□□□□ -1
SOX6-213ENST00000530378 LRRC10Q5BKY1 277 aa8.83□□□□□ -1
SOX6-213ENST00000530378 ATPAF1Q5TC12 328 aaPredicted RBP8.83□□□□□ -1
SOX6-213ENST00000530378 ZNF57Q68EA5 555 aaPredicted RBP8.83□□□□□ -1
SOX6-213ENST00000530378 C16orf87Q6PH81 154 aa8.83□□□□□ -1
SOX6-213ENST00000530378 NLRC3Q7RTR2 1065 aa8.83□□□□□ -1
SOX6-213ENST00000530378 FAM185AQ8N0U4 392 aa8.83□□□□□ -1
SOX6-213ENST00000530378 OR13A1Q8NGR1 328 aa8.83□□□□□ -1
SOX6-213ENST00000530378 TRIM63Q969Q1 353 aa8.83□□□□□ -1
SOX6-213ENST00000530378 NEIL1Q96FI4 390 aaPredicted RBP8.83□□□□□ -1
SOX6-213ENST00000530378 MED30Q96HR3 178 aa8.83□□□□□ -1
SOX6-213ENST00000530378 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
SOX6-213ENST00000530378 C19orf12Q9NSK7 152 aa8.83□□□□□ -1
SOX6-213ENST00000530378 CLN8Q9UBY8 286 aa8.83□□□□□ -1
SOX6-213ENST00000530378 TRAPPC2LQ9UL33 140 aa8.83□□□□□ -1
SOX6-213ENST00000530378 EDARQ9UNE0 448 aa8.83□□□□□ -1
SOX6-213ENST00000530378 CELSR1Q9NYQ6 3014 aa8.83□□□□□ -1
SOX6-213ENST00000530378 ODAMA1E959 279 aa8.82□□□□□ -1
SOX6-213ENST00000530378 ORC5O43913 435 aa8.82□□□□□ -1
SOX6-213ENST00000530378 NAPSAO96009 420 aa8.82□□□□□ -1
SOX6-213ENST00000530378 IGHV2-5P01817 119 aa8.82□□□□□ -1
SOX6-213ENST00000530378 MELTFP08582 738 aa8.82□□□□□ -1
SOX6-213ENST00000530378 SSTR5P35346 364 aa8.82□□□□□ -1
SOX6-213ENST00000530378 INPP1P49441 399 aa8.82□□□□□ -1
SOX6-213ENST00000530378 P2RX3P56373 397 aa8.82□□□□□ -1
SOX6-213ENST00000530378 IFITM3Q01628 133 aa8.82□□□□□ -1
SOX6-213ENST00000530378 LTC4SQ16873 150 aa8.82□□□□□ -1
SOX6-213ENST00000530378 TCF23Q7RTU1 214 aa8.82□□□□□ -1
SOX6-213ENST00000530378 GDPD1Q8N9F7 314 aa8.82□□□□□ -1
SOX6-213ENST00000530378 PPP1R35Q8TAP8 253 aa8.82□□□□□ -1
SOX6-213ENST00000530378 SNAPC3Q92966 411 aa8.82□□□□□ -1
SOX6-213ENST00000530378 Q96MF0 132 aa8.82□□□□□ -1
SOX6-213ENST00000530378 DNTTIP1Q9H147 329 aa8.82□□□□□ -1
SOX6-213ENST00000530378 PATZ1Q9HBE1 687 aaKnown RBP8.82□□□□□ -1
SOX6-213ENST00000530378 MIOXQ9UGB7 285 aa8.82□□□□□ -1
SOX6-213ENST00000530378 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
SOX6-213ENST00000530378 TLN2Q9Y4G6 2542 aa8.82□□□□□ -1
SOX6-213ENST00000530378 VWC2LB2RUY7 222 aa8.82□□□□□ -1
SOX6-213ENST00000530378 RNF223E7ERA6 249 aa8.82□□□□□ -1
SOX6-213ENST00000530378 M0QYG6 137 aa8.82□□□□□ -1
SOX6-213ENST00000530378 CTDSPLO15194 276 aa8.82□□□□□ -1
SOX6-213ENST00000530378 NDUFA2O43678 99 aa8.82□□□□□ -1
SOX6-213ENST00000530378 MT-ND4P03905 459 aa8.82□□□□□ -1
SOX6-213ENST00000530378 WNT2P09544 360 aa8.82□□□□□ -1
SOX6-213ENST00000530378 PTBP1P26599 531 aaKnown RBP eCLIP8.82□□□□□ -15e-10■■■■□ 24.8
SOX6-213ENST00000530378 GNB2P62879 340 aa8.82□□□□□ -1
SOX6-213ENST00000530378 LCN2P80188 198 aa8.82□□□□□ -1
SOX6-213ENST00000530378 PRB3Q04118 309 aaPredicted RBP8.82□□□□□ -1
SOX6-213ENST00000530378 ZNF273Q14593 569 aa8.82□□□□□ -1
SOX6-213ENST00000530378 ARL6IP1Q15041 203 aa8.82□□□□□ -1
SOX6-213ENST00000530378 WDR25Q64LD2 544 aaPredicted RBP8.82□□□□□ -1
SOX6-213ENST00000530378 FAM53AQ6NSI3 398 aaPredicted RBP8.82□□□□□ -1
SOX6-213ENST00000530378 ZNF841Q6ZN19 808 aa8.82□□□□□ -1
SOX6-213ENST00000530378 DNM1P46Q6ZS02 220 aa8.82□□□□□ -1
SOX6-213ENST00000530378 BTN2A1Q7KYR7 527 aa8.82□□□□□ -1
SOX6-213ENST00000530378 KRTAP1-3Q8IUG1 177 aa8.82□□□□□ -1
SOX6-213ENST00000530378 WFDC11Q8NEX6 87 aa8.82□□□□□ -1
SOX6-213ENST00000530378 OR4D10Q8NGI6 311 aa8.82□□□□□ -1
SOX6-213ENST00000530378 POM121Q96HA1 1249 aa8.82□□□□□ -1
SOX6-213ENST00000530378 SCPEP1Q9HB40 452 aa8.82□□□□□ -1
SOX6-213ENST00000530378 KAAG1Q9UBP8 84 aa8.82□□□□□ -1
SOX6-213ENST00000530378 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
SOX6-213ENST00000530378 ACANP16112 2415 aa8.81□□□□□ -1
SOX6-213ENST00000530378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.81□□□□□ -1
SOX6-213ENST00000530378 FAM172BPA6NC97 362 aa8.81□□□□□ -1
SOX6-213ENST00000530378 C22orf46C9J442 243 aa8.81□□□□□ -1
SOX6-213ENST00000530378 FAM157AC9JC47 383 aa8.81□□□□□ -1
SOX6-213ENST00000530378 H3BUI4 141 aa8.81□□□□□ -1
SOX6-213ENST00000530378 NDUFS8O00217 210 aa8.81□□□□□ -1
SOX6-213ENST00000530378 GSTZ1O43708 216 aaPredicted RBP8.81□□□□□ -1
SOX6-213ENST00000530378 UPK1BO75841 260 aa8.81□□□□□ -1
SOX6-213ENST00000530378 RBBP9O75884 186 aa8.81□□□□□ -1
SOX6-213ENST00000530378 PMP2P02689 132 aa8.81□□□□□ -1
SOX6-213ENST00000530378 CCL3L1P16619 93 aa8.81□□□□□ -1
SOX6-213ENST00000530378 OMGP23515 440 aa8.81□□□□□ -1
SOX6-213ENST00000530378 ERVFRD-1P60508 538 aa8.81□□□□□ -1
SOX6-213ENST00000530378 RPL31P62899 125 aaKnown RBP8.81□□□□□ -1
SOX6-213ENST00000530378 MRPS10P82664 201 aaKnown RBP8.81□□□□□ -1
SOX6-213ENST00000530378 ESCO2Q56NI9 601 aa8.81□□□□□ -1
SOX6-213ENST00000530378 STEAP3Q658P3 488 aa8.81□□□□□ -1
SOX6-213ENST00000530378 BEST4Q8NFU0 473 aa8.81□□□□□ -1
SOX6-213ENST00000530378 OR5D13Q8NGL4 314 aa8.81□□□□□ -1
SOX6-213ENST00000530378 OR1L1Q8NH94 360 aa8.81□□□□□ -1
SOX6-213ENST00000530378 RFESDQ8TAC1 157 aa8.81□□□□□ -1
SOX6-213ENST00000530378 C15orf40Q8WUR7 153 aa8.81□□□□□ -1
SOX6-213ENST00000530378 IL1F10Q8WWZ1 152 aa8.81□□□□□ -1
SOX6-213ENST00000530378 NINJ1Q92982 152 aa8.81□□□□□ -1
SOX6-213ENST00000530378 MBD6Q96DN6 1003 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms