RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF44P15621 663 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 CD34P28906 385 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 BRS3P32247 399 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 RAB13P51153 203 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 DOC2BQ14184 412 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 CDK5R1Q15078 307 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 KISS1Q15726 138 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 TPRX1Q8N7U7 411 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 OR10AC1Q8NH08 325 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 OR5AK2Q8NH90 309 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 SMIM19Q96E16 107 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 NCOR1P1Q9H4R4 102 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 SERTAD4Q9NUC0 356 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
CAPN1-212ENST00000527887 MEX3AA1L020 520 aaKnown RBP11.42□□□□□ -0.58
CAPN1-212ENST00000527887 SIRPB1O00241 398 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 DEGS1O15121 323 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 PEX14O75381 377 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 ZFPL1O95159 310 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 HCKP08631 526 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 TMEM225BP0DP42 221 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 CEACAM3P40198 252 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 MTNR1BP49286 362 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 PLA1AQ53H76 456 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 ELP2Q6IA86 826 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF565Q8N9K5 539 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 PXT1Q8NFP0 134 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 OR4D6Q8NGJ1 314 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 RFT1Q96AA3 541 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 TSC22D3Q99576 134 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 WNT10AQ9GZT5 417 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 OR51E2Q9H255 320 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 OR6C3Q9NZP0 311 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 DHDHQ9UQ10 334 aa11.42□□□□□ -0.58
CAPN1-212ENST00000527887 A0A087X0M5 115 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 A0A1B0GX30 115 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 ODAMA1E959 279 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
CAPN1-212ENST00000527887 LEUTXA8MZ59 168 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 OOSP1A8MZH6 123 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 FBXO24O75426 580 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 GPX5O75715 221 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 SC5DO75845 299 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 IL1AP01583 271 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 CALCBP10092 127 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 CDK2P24941 298 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 PTGFRP43088 359 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 PRRX1P54821 245 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 SNU13P55769 128 aaKnown RBP11.41□□□□□ -0.58
CAPN1-212ENST00000527887 ZP1P60852 638 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 AESQ08117 197 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 LSAMPQ13449 338 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 SPCS2Q15005 226 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 KRBOX4Q5JUW0 171 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 Q6P435 159 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 NDUFA11Q86Y39 141 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 OR5D18Q8NGL1 313 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 KCTD7Q96MP8 289 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 SPACA5Q96QH8 159 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
CAPN1-212ENST00000527887 TXNL4BQ9NX01 149 aaKnown RBP11.41□□□□□ -0.58
CAPN1-212ENST00000527887 E9PI62 339 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 SLC33A1O00400 549 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-212ENST00000527887 TOR1AO14656 332 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 TMEM127O75204 238 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 CD2P06729 351 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 RAB3AP20336 220 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 GLIPR1P48060 266 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 KCNJ3P48549 501 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 SERPINB10P48595 397 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 VBP1P61758 197 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 PAX5Q02548 391 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 SCN1BQ07699 218 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 YIF1BQ5BJH7 314 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 ZNF529Q6P280 563 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 TPRA1Q86W33 373 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 Q8NFD4 153 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 OR4F17Q8NGA8 305 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 OR51T1Q8NGJ9 327 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 GPR148Q8TDV2 347 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 WIPF2Q8TF74 440 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-212ENST00000527887 CAPSLQ8WWF8 208 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 GHSRQ92847 366 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 PGLYRP3Q96LB9 341 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 OR4F4Q96R69 305 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 BARHL1Q9BZE3 327 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 DCSTAMPQ9H295 470 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 LIN7BQ9HAP6 207 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 PCDHB16Q9NRJ7 776 aa11.4□□□□□ -0.58
CAPN1-212ENST00000527887 CCDC59Q9P031 241 aaKnown RBP11.4□□□□□ -0.58
CAPN1-212ENST00000527887 SIRT4Q9Y6E7 314 aaPredicted RBP11.4□□□□□ -0.58
CAPN1-212ENST00000527887 LOC100506127A0A0U1RQW1 187 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms