RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 DPY19L4Q7Z388 723 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 UEVLDQ8IX04 471 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF440Q8IYI8 595 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 MUC15Q8N387 334 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM217Q8N7C4 229 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TSTD1Q8NFU3 115 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 OR2T33Q8NG76 320 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52R1Q8NGF1 315 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 MFSD8Q8NHS3 518 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 UBTD2Q8WUN7 234 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 DCUN1D4Q92564 292 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 NRGNQ92686 78 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 DAZLQ92904 295 aaKnown RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 FGF11Q92914 225 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 PIGTQ969N2 578 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 WBP2Q969T9 261 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 RERGQ96A58 199 aaPredicted RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 PTX4Q96A99 478 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A38Q96DW6 304 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 ZMYND19Q96E35 227 aaPredicted RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 OR10C1Q96KK4 312 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF681Q96N22 645 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 LRRC3BQ96PB8 259 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TBX5Q99593 518 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 DUSP16Q9BY84 665 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 NMES1Q9C002 83 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM39BQ9GZU3 492 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 EIF5A2Q9GZV4 153 aaKnown RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 CHRNA10Q9GZZ6 450 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A18Q9H1K4 315 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TBC1D17Q9HA65 648 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 LYRM4Q9HD34 91 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 TM7SF3Q9NS93 570 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 FBXL17Q9UF56 701 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 HSPB8Q9UJY1 196 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 MCTS1Q9ULC4 181 aaKnown RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 BOKQ9UMX3 212 aaPredicted RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 DAPP1Q9UN19 280 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 MRPS28Q9Y2Q9 187 aaKnown RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 PAM16Q9Y3D7 125 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 CSDC2Q9Y534 153 aaKnown RBP3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 STYXL1Q9Y6J8 313 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 PLXNA3P51805 1871 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 LOC285556D6RIA3 1793 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 NCKAP5O14513 1909 aa3.17□□□□□ -1.9
CLNS1A-209ENST00000527299 COL2A1P02458 1487 aaPredicted RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SCN1AP35498 2009 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CKAP5Q14008 2032 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ODAMA1E959 279 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MAP1LC3B2A6NCE7 125 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 A6NIN4 97 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC38A8A6NNN8 435 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 HHLA1C9JL84 531 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 KIR2DS3K7RE56 304 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB29O14966 203 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF207O43670 478 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 UTS2O95399 124 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 NRASP01111 189 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PFN1P07737 140 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SEC11BP0C7V7 166 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 DANCRP0C864 163 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 AKAIN1P0CW23 69 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ST6GAL1P15907 406 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CELP19835 753 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 NMBRP28336 390 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MDH2P40926 338 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 AMTP48728 403 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 HINT1P49773 126 aaPredicted RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ASCL1P50553 236 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 GPM6AP51674 278 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CNN1P51911 297 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 FOXA1P55317 472 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 TAS2R20P59543 309 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 HLA-DRB3P79483 266 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PSG9Q00887 426 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF92Q03936 586 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 EIF2B1Q14232 305 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF266Q14584 549 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 KIR2DS3Q14952 304 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 UPP1Q16831 310 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SPATA45Q537H7 98 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SYT14P1Q58G82 188 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC25A53Q5H9E4 307 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 AMMECR1LQ6DCA0 310 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 MRPL54Q6P161 138 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 TPRG1Q6ZUI0 275 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 Q6ZVH6 145 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 RPS27LQ71UM5 84 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 FA2HQ7L5A8 372 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 PRSS45Q7RTY3 260 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CPEB2Q7Z5Q1 589 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 TSEN54Q7Z6J9 526 aaKnown RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 CENPVQ7Z7K6 275 aaPredicted RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF429Q86V71 674 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM173Q86WV6 379 aaPredicted RBP3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SFTPA1Q8IWL2 248 aa3.16□□□□□ -1.9
CLNS1A-209ENST00000527299 SAXO1Q8IYX7 474 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms