RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 NPY4RP50391 375 aa17.17■□□□□ 0.34
SMCO4-203ENST00000526869 HOXA4Q00056 320 aaPredicted RBP17.17■□□□□ 0.34
SMCO4-203ENST00000526869 TMED4Q7Z7H5 227 aa17.17■□□□□ 0.34
SMCO4-203ENST00000526869 NCOR1P1Q9H4R4 102 aa17.17■□□□□ 0.34
SMCO4-203ENST00000526869 PCDHB10Q9UN67 800 aa17.17■□□□□ 0.34
SMCO4-203ENST00000526869 TANC2Q9HCD6 1990 aa17.17■□□□□ 0.34
SMCO4-203ENST00000526869 IGHV3OR15-7A0A075B7D8 119 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 TMEM178BH3BS89 294 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 C19orf84I3L1E1 186 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 LGALS8O00214 317 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 MGST3O14880 152 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 CYB5R3P00387 301 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-203ENST00000526869 TK1P04183 234 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 OR4E1P0C645 316 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 SULT1A3P0DMM9 295 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 SULT1A4P0DMN0 295 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 UCP3P55916 312 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 SEC61A1P61619 476 aaKnown RBP17.16■□□□□ 0.34
SMCO4-203ENST00000526869 HMGN3Q15651 99 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ZCCHC24Q8N2G6 241 aaKnown RBP17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ZNF561Q8N587 486 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ASCC1Q8N9N2 400 aaKnown RBP17.16■□□□□ 0.34
SMCO4-203ENST00000526869 OR5T2Q8NGG2 359 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ZNF431Q8TF32 576 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-203ENST00000526869 COQ2Q96H96 371 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ST6GAL2Q96JF0 529 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 SHARPINQ9H0F6 387 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 DNTTIP1Q9H147 329 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 CBLN4Q9NTU7 201 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 TMEM106BQ9NUM4 274 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 METRNQ9UJH8 293 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 TRAPPC2LQ9UL33 140 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ICE1Q9Y2F5 2266 aa17.16■□□□□ 0.34
SMCO4-203ENST00000526869 ROS1P08922 2347 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 K7N7A8 449 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 SSNA1O43805 119 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 SCTP09683 121 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 RCC1P18754 421 aaPredicted RBP17.15■□□□□ 0.34
SMCO4-203ENST00000526869 FCGR2CP31995 323 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 GABRA2P47869 451 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 FCN2Q15485 313 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 C4orf46Q504U0 113 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 TRAT1Q6PIZ9 186 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 DTX2Q86UW9 622 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 ZFAND1Q8TCF1 268 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 MOB3AQ96BX8 217 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 FXYD6Q9H0Q3 95 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 FAM234AQ9H0X4 552 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 ZNF69Q9UC07 566 aa17.15■□□□□ 0.34
SMCO4-203ENST00000526869 KLF2Q9Y5W3 355 aaPredicted RBP17.15■□□□□ 0.34
SMCO4-203ENST00000526869 SPTBN1Q01082 2364 aaKnown RBP17.15■□□□□ 0.34
SMCO4-203ENST00000526869 DYSFO75923 2080 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 CACNA1DQ01668 2161 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 TRAV38-1A0A0B4J264 116 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 TUSC2O75896 110 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 CTSDP07339 412 aaPredicted RBP17.14■□□□□ 0.33
SMCO4-203ENST00000526869 PGAM2P15259 253 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 ZBTB25P24278 435 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 HERV-K104P61576 105 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 DHODHQ02127 395 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 HERPUD1Q15011 391 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 IGSF11Q5DX21 431 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 C6orf183Q5T699 404 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 C11orf71Q6IPW1 123 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 LYG2Q86SG7 212 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 SPICQ8N5J4 248 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 OR5D13Q8NGL4 314 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 LIME1Q9H400 295 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 C5orf66Q9H5L9 145 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 ZNF665Q9H7R5 613 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 ING3Q9NXR8 418 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 KCNIP1Q9NZI2 227 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 KIF25Q9UIL4 384 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 C14orf166Q9Y224 244 aaKnown RBP17.14■□□□□ 0.33
SMCO4-203ENST00000526869 DOPEY1Q5JWR5 2465 aa17.14■□□□□ 0.33
SMCO4-203ENST00000526869 TRBV6-7A0A0A0MS04 114 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 IGKV1-6A0A0C4DH72 117 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 IGHV1-69-2A0A0G2JMI3 117 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 FSTL3O95633 263 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 ZNF728P0DKX0 622 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 CD300CQ08708 224 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 TMEM128Q5BJH2 165 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 KRBOX4Q5JUW0 171 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 FAM201AQ5SY85 155 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 ZNF788Q6ZQV5 615 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 MUC20Q8N307 709 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-203ENST00000526869 CAPSLQ8WWF8 208 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 LURAP1Q96LR2 239 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 GAFA1Q96PS6 74 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 RTBDNQ9BSG5 229 aaPredicted RBP17.13■□□□□ 0.33
SMCO4-203ENST00000526869 OPN4Q9UHM6 478 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 ARFGEF3Q5TH69 2177 aa17.13■□□□□ 0.33
SMCO4-203ENST00000526869 PPIAL4EA0A075B759 164 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 NKX6-3A6NJ46 265 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 A6NNC1 897 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 PPIAL4DF5H284 164 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 BOLA2-SMG1P6H3BVE0 249 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 PPYP01298 95 aa17.12■□□□□ 0.33
SMCO4-203ENST00000526869 TFF1P04155 84 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms