RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 OR52W1Q6IF63 320 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 OR10K2Q6IF99 312 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 BEND2Q8NDZ0 799 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 OR6M1Q8NGM8 313 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 OR13A1Q8NGR1 328 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM46BQ96A09 425 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 Q96M66 194 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 MEGF9Q9H1U4 602 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 PLGRKTQ9HBL7 147 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 SPACA1Q9HBV2 294 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 PEX16Q9Y5Y5 336 aa13.18□□□□□ -0.3
SSSCA1-202ENST00000526433 TRAV39A0A0B4J263 110 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 KBTBD11-OT1A0A1B0GTJ5 212 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 ODF3BA8MYP8 253 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 VSIG8P0DPA2 414 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 HKR1P10072 659 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 FUT3P21217 361 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 OMGP23515 440 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 PAX6P26367 422 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 GDNFP39905 211 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 GLP1RP43220 463 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 PSMD7P51665 324 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 ZNF626Q68DY1 528 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 SIGIRRQ6IA17 410 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 RAB12Q6IQ22 244 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 BAIAP2L2Q6UXY1 529 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 LHFPL4Q7Z7J7 247 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 KCNG3Q8TAE7 436 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 CLEC7AQ9BXN2 247 aa13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 RCC2Q9P258 522 aaKnown RBP13.17□□□□□ -0.3
SSSCA1-202ENST00000526433 TENM1Q9UKZ4 2725 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 TRAV1-2A0A0B4J238 106 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 TMEM30CPA0ZSE6 113 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 H3BUI4 141 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 SLC17A2O00624 439 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 BPNT1O95861 308 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 MT-ND4P03905 459 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 GALP22466 123 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 QRFPP83859 136 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 P2RY14Q15391 338 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 C12orf54Q6X4T0 127 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 ABHD12Q8N2K0 398 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 SSX3Q99909 188 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 KCNK15Q9H427 330 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 CALYQ9NYX4 217 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 TBL2Q9Y4P3 447 aaKnown RBP13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 V9GY05 133 aa13.16□□□□□ -0.3
SSSCA1-202ENST00000526433 TMEM14DPA8MWL7 114 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 GLAP06280 429 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 GZMHP20718 246 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 NFYBP25208 207 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 UNC119Q13432 240 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 NEDD8Q15843 81 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 RAB11BQ15907 218 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 LDLRAD2Q5SZI1 272 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 C22orf42Q6IC83 251 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 RTN4RL2Q86UN3 420 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 RFESDQ8TAC1 157 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 CCDC107Q8WV48 283 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 DYRK2Q92630 601 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 MALSU1Q96EH3 234 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 LINC00574Q9H8X3 128 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 ETAA1Q9NY74 926 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 IDI2-AS1Q9NZ38 188 aa13.15□□□□□ -0.3
SSSCA1-202ENST00000526433 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 UBE2QL1A1L167 161 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 FAM172BPA6NC97 362 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 BTBD17A6NE02 478 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 PDCD5O14737 125 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 GPR137BO60478 399 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 IL1AP01583 271 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 CRYBA1P05813 215 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 ARSBP15848 533 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 CD34P28906 385 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 COMPP49747 757 aaPredicted RBP13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 CLDN12P56749 244 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 FOXL1Q12952 345 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 LRRC75BQ2VPJ9 315 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 C2orf76Q3KRA6 126 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 MINOS1Q5TGZ0 78 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 OR5R1Q8NH85 324 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 KIRREL1Q96J84 757 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 TM2D1Q9BX74 207 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 TMEM59Q9BXS4 323 aa13.14□□□□□ -0.31
SSSCA1-202ENST00000526433 ZNF286AQ9HBT8 521 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms