RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 SPACA1Q9HBV2 294 aa10.62□□□□□ -0.71
SMPD1-202ENST00000526280 RCC2Q9P258 522 aaKnown RBP10.62□□□□□ -0.71
SMPD1-202ENST00000526280 DAPK2Q9UIK4 370 aa10.62□□□□□ -0.71
SMPD1-202ENST00000526280 KIAA2026Q5HYC2 2103 aa10.62□□□□□ -0.71
SMPD1-202ENST00000526280 SMIM30A4D0T7 59 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 H3BUI4 141 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 CTDSP2O14595 271 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 LDLRAD4O15165 306 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 UPK1BO75841 260 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 CLEC2LP0C7M8 214 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 FUT3P21217 361 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 DLX6P56179 175 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 VMO1Q7Z5L0 202 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 CCDC190Q86UF4 302 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 C11orf42Q8N5U0 333 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 CORO2AQ92828 525 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 LPAR5Q9H1C0 372 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 NCOR1P1Q9H4R4 102 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 METTL8Q9H825 291 aaKnown RBP10.61□□□□□ -0.71
SMPD1-202ENST00000526280 UNKLQ9H9P5 680 aaKnown RBP10.61□□□□□ -0.71
SMPD1-202ENST00000526280 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 NUP50Q9UKX7 468 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
SMPD1-202ENST00000526280 TMEM272A0A1B0GTI8 110 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 ODAMA1E959 279 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 MEX3AA1L020 520 aaKnown RBP10.6□□□□□ -0.71
SMPD1-202ENST00000526280 C17orf98A8MV24 154 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 GLAP06280 429 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 ZNF728P0DKX0 622 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 IGHV4-38-2P0DP08 117 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 SLC2A2P11168 524 aaPredicted RBP10.6□□□□□ -0.71
SMPD1-202ENST00000526280 CCL3L1P16619 93 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 PRTN3P24158 256 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 MXD1Q05195 221 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 OXA1LQ15070 435 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 RSBN1Q5VWQ0 802 aaPredicted RBP10.6□□□□□ -0.71
SMPD1-202ENST00000526280 RAB12Q6IQ22 244 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 SFXN4Q6P4A7 337 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 SNX29P2Q8IUI4 249 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 FAM89BQ8N5H3 189 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 PLPPR1Q8TBJ4 325 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 TNFRSF14Q92956 283 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 SLC25A46Q96AG3 418 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 PPP1R14BQ96C90 147 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
SMPD1-202ENST00000526280 LIN7BQ9HAP6 207 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 ING3Q9NXR8 418 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
SMPD1-202ENST00000526280 UBE2J1Q9Y385 318 aaPredicted RBP10.6□□□□□ -0.71
SMPD1-202ENST00000526280 TRGV10A0A0A0MS01 117 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 A0A0B4J203 849 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 CENPVL3A0A0U1RRI6 287 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 hCG_1809904A0A1W2PP81 198 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 A0A1W2PPE2 198 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 A0A1W2PR64 198 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 A0A1W2PRV1 198 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 MCRIP1C9JLW8 97 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 PDCD6O75340 191 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 EPHA1P21709 976 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 TNFSF8P32971 234 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 DLX1P56177 255 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 PLA2G7Q13093 441 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
SMPD1-202ENST00000526280 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 SPANXN2Q5MJ10 180 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 GPR157Q5UAW9 335 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 SLC35E4Q6ICL7 350 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 LHX4Q969G2 390 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 ZNF714Q96N38 554 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 ABCB10Q9NRK6 738 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 OR6C3Q9NZP0 311 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 KIF25Q9UIL4 384 aa10.59□□□□□ -0.71
SMPD1-202ENST00000526280 IGHV3OR16-10A0A075B7F0 116 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 MEIKINA0A087WXM9 373 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 RBP4P02753 201 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 RAB6AP20340 208 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 CHATP28329 748 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 BLVRBP30043 206 aaPredicted RBP10.58□□□□□ -0.71
SMPD1-202ENST00000526280 EFNB2P52799 333 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 BPIFB3P59826 476 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 ERVFRD-1P60508 538 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 SCGB2A2Q13296 93 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 ZNF497Q6ZNH5 498 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 TRAPPC6BQ86SZ2 158 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 ZNF565Q8N9K5 539 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 NEK7Q8TDX7 302 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 PTX4Q96A99 478 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 NEDD4LQ96PU5 975 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 TAS2R3Q9NYW6 316 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 ZNF69Q9UC07 566 aa10.58□□□□□ -0.71
SMPD1-202ENST00000526280 IGHV1-69DA0A0B4J2H0 117 aa10.58□□□□□ -0.72
SMPD1-202ENST00000526280 TMEM30CPA0ZSE6 113 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms