RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 LOC102723996A0A087X1L8 192 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 ZNF205O95201 554 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 LCATP04180 440 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 TAS2R60P59551 318 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 PCBD1P61457 104 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 JOSD1Q15040 202 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 ZNF818PQ6ZRF7 136 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SSX9Q7RTT3 188 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 TGIF2LYQ8IUE0 185 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 CA5BP1Q8WTZ4 195 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 ZNF845Q96IR2 970 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 ACTR3CQ9C0K3 210 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 ZNF442Q9H7R0 627 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SH2D2AQ9NP31 389 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 LRP5LA4QPB2 252 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SLC22A20A6NK97 555 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 KIAA1324LA8MWY0 1029 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 SLC31A2O15432 143 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 ST8SIA5O15466 376 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 ZIC3O60481 467 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 GLI4P10075 376 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 LIFP15018 202 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 MPV17LQ2QL34 196 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 RIPPLY2Q5TAB7 128 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 MRGPRGQ86SM5 289 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 BEND2Q8NDZ0 799 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 RNASE11Q8TAA1 199 aaKnown RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 NOL4LQ96MY1 436 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 ARID1AO14497 2285 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 C9J4A7 227 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 CST7O76096 145 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 OMGP23515 440 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 RAC3P60763 192 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 GAMTQ14353 236 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SHHQ15465 462 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 NRN1LQ496H8 165 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 GAPTQ8N292 157 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SMRP1Q8NCR6 262 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 DNASE2BQ8WZ79 361 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 EXTL1Q92935 676 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 LSM10Q969L4 123 aaKnown RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 PINX1Q96BK5 328 aaKnown RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 PACRGQ96M98 296 aaPredicted RBP6.87□□□□□ -1.31
BDNF-213ENST00000525950 HIST1H2BLQ99880 126 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 TAAR3PQ9P1P4 343 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 VAX2Q9UIW0 290 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 URGCP-MRPS24S4R325 110 aa6.87□□□□□ -1.31
BDNF-213ENST00000525950 SMCO3A2RU48 225 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 FAM221AA4D161 298 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 S100GP29377 79 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 LTBRP36941 435 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 RAB4BP61018 213 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 GFI1BQ5VTD9 330 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ZNF774Q6NX45 483 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
BDNF-213ENST00000525950 LINC00596Q86U02 117 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 SUMF1Q8NBK3 374 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 RAB24Q969Q5 203 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 JSRP1Q96MG2 331 aaPredicted RBP6.86□□□□□ -1.31
BDNF-213ENST00000525950 C1QTNF5Q9BXJ0 243 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 TPSD1Q9BZJ3 242 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ATP23Q9Y6H3 246 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 SCRG1O75711 98 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 IFNA1P01562 189 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 FGF7P21781 194 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 FGF12P61328 243 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 RUNX1Q01196 453 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ZNF154Q13106 437 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 RAB30Q15771 203 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 COLCA1Q6ZS62 124 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 SLC25A45Q8N413 288 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 OR10A7Q8NGE5 316 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 S100PBPQ96BU1 408 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 UCN2Q96RP3 112 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 PROK2Q9HC23 129 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 RARRES3Q9UL19 164 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 A0A087X0M5 115 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 A0A1B0GX30 115 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 C2CD4DB7Z1M9 353 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 PGLYRP1O75594 196 aaPredicted RBP6.86□□□□□ -1.31
BDNF-213ENST00000525950 OR7C1O76099 320 aaPredicted RBP6.86□□□□□ -1.31
BDNF-213ENST00000525950 FABP4P15090 132 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ZNF32P17041 273 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 F2RP25116 425 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 IL2RGP31785 369 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 PDLIM4P50479 330 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 PSG4Q00888 419 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 SPIN3Q5JUX0 258 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 PLCXD3Q63HM9 321 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ZNF295-AS1Q8N0V1 137 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 ZNF837Q96EG3 531 aaPredicted RBP6.86□□□□□ -1.31
BDNF-213ENST00000525950 STRADBQ9C0K7 418 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 OR2H1Q9GZK4 316 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
BDNF-213ENST00000525950 WNT5BQ9H1J7 359 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms