RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SPIN4Q56A73 249 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 NIPAL1Q6NVV3 410 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 CLEC20AQ6ZU45 233 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 NIT1Q86X76 327 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 SLC25A45Q8N413 288 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 DNAAF3Q8N9W5 541 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 OR4K17Q8NGC6 315 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 OR5C1Q8NGR4 320 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 ZNF75CPQ92670 426 aaPredicted RBP1.46□□□□□ -2.18
CD44-215ENST00000525241 HIST1H2BAQ96A08 127 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 CIDECQ96AQ7 238 aaPredicted RBP1.46□□□□□ -2.18
CD44-215ENST00000525241 PITX2Q99697 317 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 VPREB3Q9UKI3 123 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 CCL26Q9Y258 94 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 BTRCQ9Y297 605 aa1.46□□□□□ -2.18
CD44-215ENST00000525241 BZW2Q9Y6E2 419 aaKnown RBP1.46□□□□□ -2.18
CD44-215ENST00000525241 ADGRB3O60242 1522 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 ARAP3Q8WWN8 1544 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 TMEM250H0YL14 139 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 KLRC4-KLRK1H3BQV0 150 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 EEF1E1O43324 174 aaKnown RBP1.45□□□□□ -2.18
CD44-215ENST00000525241 PRB1P04280 392 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 GIMD1P0DJR0 217 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 TSPOP30536 169 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 RANBP1P43487 201 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 HBG1P69891 147 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 HBG2P69892 147 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 APOFQ13790 326 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 C10orf107Q8IVU9 208 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 GATD1Q8NB37 220 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 OR10P1Q8NGE3 313 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 OR2AE1Q8NHA4 323 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 ZMYND19Q96E35 227 aaPredicted RBP1.45□□□□□ -2.18
CD44-215ENST00000525241 APOL4Q9BPW4 351 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 ALX4Q9H161 411 aaPredicted RBP1.45□□□□□ -2.18
CD44-215ENST00000525241 POMPQ9Y244 141 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 CEP170Q5SW79 1584 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 ICE1Q9Y2F5 2266 aa1.45□□□□□ -2.18
CD44-215ENST00000525241 FAM183AA6NL82 134 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 hCG_2039718K7EN88 272 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 CSTAP01040 98 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 ZNF3P17036 446 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 GTF2H1P32780 548 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 RHOAP61586 193 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 VAMP3Q15836 100 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 HBMQ6B0K9 141 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 Q6ZS52 159 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 ZNF767PQ75MW2 155 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 SSX7Q7RTT5 188 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 RBM45Q8IUH3 476 aaKnown RBP1.44□□□□□ -2.18
CD44-215ENST00000525241 AICDAQ9GZX7 198 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 KCNIP2Q9NS61 270 aa1.44□□□□□ -2.18
CD44-215ENST00000525241 TBL2Q9Y4P3 447 aaKnown RBP1.44□□□□□ -2.18
CD44-215ENST00000525241 F5H5T6 163 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 SLC25A20O43772 301 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 S1PR2O95136 353 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 BLVRBP30043 206 aaPredicted RBP1.43□□□□□ -2.18
CD44-215ENST00000525241 PRDX1Q06830 199 aaKnown RBP1.43□□□□□ -2.18
CD44-215ENST00000525241 Q6ZT83 130 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 RNASE11Q8TAA1 199 aaKnown RBP1.43□□□□□ -2.18
CD44-215ENST00000525241 CLDN23Q96B33 292 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 TXNDC17Q9BRA2 123 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
CD44-215ENST00000525241 MYO9BQ13459 2157 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 TRANK1O15050 2925 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 IGHV3OR15-7A0A075B7D8 119 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 MGAT4DA6NG13 374 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 ARGFXA6NJG6 315 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 ODF3BA8MYP8 253 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 H0YC42 278 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 LY6LH3BQJ8 138 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 I3L4J1 428 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 SHOX2O60902 331 aaPredicted RBP1.42□□□□□ -2.18
CD44-215ENST00000525241 ZNF189O75820 626 aaPredicted RBP1.42□□□□□ -2.18
CD44-215ENST00000525241 CRABP1P29762 137 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 OR8G1Q15617 311 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 TMEM176BQ3YBM2 270 aaPredicted RBP1.42□□□□□ -2.18
CD44-215ENST00000525241 LAMTOR1Q6IAA8 161 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 FAM183BPQ6ZVS7 135 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 OLIG3Q7RTU3 272 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 FAM19A3Q7Z5A8 133 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 CD200R1Q8TD46 325 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 TTTY12Q9BZ98 90 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 CLEC2DQ9UHP7 191 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 TMEM94Q12767 1356 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 ADAMTS7Q9UKP4 1686 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 COL18A1P39060 1754 aa1.42□□□□□ -2.18
CD44-215ENST00000525241 IGKV1-12A0A0C4DH73 117 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 LOC102725191A0A1B0GVB3 256 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 CDIPTO14735 213 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 UBDO15205 165 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 IGKV1D-12P01611 117 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 SPNP16150 400 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 PYCR1P32322 319 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 CBX5P45973 191 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 CARD18P57730 90 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 XIAPP98170 497 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 TRAM1Q15629 374 aa1.41□□□□□ -2.18
CD44-215ENST00000525241 TRIP13Q15645 432 aaPredicted RBP1.41□□□□□ -2.18
CD44-215ENST00000525241 DGAT2L6Q6ZPD8 337 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms