RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 HIST2H3AQ71DI3 136 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CEND1Q8N111 149 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 SLC25A45Q8N413 288 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 ARIH2OSQ8N7S6 290 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OR2M7Q8NG81 312 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OR2Z1Q8NG97 314 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OR5K1Q8NHB7 308 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 SLC35B4Q969S0 331 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OR52B2Q96RD2 323 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CAMK2N2Q96S95 79 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 MED18Q9BUE0 208 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 OR51I2Q9H344 312 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 C11orf49Q9H6J7 331 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 ENY2Q9NPA8 101 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 TMEM216Q9P0N5 145 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 VPREB3Q9UKI3 123 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 TIMM22Q9Y584 194 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 CCDC144AA2RUR9 1427 aa3.92□□□□□ -1.78
USP47-204ENST00000525078 A0A087WUJ7 227 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 ZFP92A6NM28 416 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 ZNF878C9JN71 531 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 K7EPK0 472 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 GYG2O15488 501 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 SLC37A4O43826 429 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 ANGPTL7O43827 346 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 IFNA21P01568 189 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 CRYBA1P05813 215 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 SOD3P08294 240 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 P0C879 139 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 CD36P16671 472 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 MP68P56378 58 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 TMEM33P57088 247 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 SNAP25P60880 206 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 RAB2AP61019 212 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 CDK10Q15131 360 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 PTPRKQ15262 1439 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 TRMT12Q53H54 448 aaKnown RBP3.91□□□□□ -1.78
USP47-204ENST00000525078 FAM71E1Q6IPT2 247 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 TMEM86BQ8N661 226 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 YIPF5Q969M3 257 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 DIRAS2Q96HU8 199 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 SLC35E1Q96K37 410 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 C18orf15Q96N68 181 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 GGTLC1Q9BX51 225 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 ZNF436Q9C0F3 470 aaPredicted RBP3.91□□□□□ -1.78
USP47-204ENST00000525078 DCSTAMPQ9H295 470 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 UBQLN4Q9NRR5 601 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 INIPQ9NRY2 104 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 SLC7A10Q9NS82 523 aa3.91□□□□□ -1.78
USP47-204ENST00000525078 YTHDF2Q9Y5A9 579 aaKnown RBP3.91□□□□□ -1.78
USP47-204ENST00000525078 IGKV6D-21A0A0A0MT36 114 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 C5orf49A4QMS7 147 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 GMNCA6NCL1 334 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 PI15O43692 258 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 EIF1BO60739 113 aaKnown RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 KCNE1P15382 129 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 CBR1P16152 277 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 NELFEP18615 380 aaKnown RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 ZBTB25P24278 435 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 ELK4P28324 431 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 DDTP30046 118 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 EIF1P41567 113 aaKnown RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 CRYBA4P53673 196 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 TNFRSF9Q07011 255 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 EBPQ15125 230 aaKnown RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 MESTQ5EB52 335 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 NEGR1Q7Z3B1 354 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 SUMF2Q8NBJ7 301 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 CPNE2Q96FN4 548 aaPredicted RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 ZNF649Q9BS31 505 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 ULBP3Q9BZM4 244 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 ARMC1Q9NVT9 282 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 OPTCQ9UBM4 332 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 OR12D3Q9UGF7 316 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 ZNF706Q9Y5V0 76 aaPredicted RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 KIF21BO75037 1637 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 CAMSAP1Q5T5Y3 1602 aa3.9□□□□□ -1.79
USP47-204ENST00000525078 SETD1AO15047 1707 aaKnown RBP3.9□□□□□ -1.79
USP47-204ENST00000525078 NACADO15069 1562 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 LOC102724200A0A096LPH7 203 aaPredicted RBP3.89□□□□□ -1.79
USP47-204ENST00000525078 FUOMA2VDF0 154 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 EPOPA6NHQ4 379 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 SRRM5B3KS81 715 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 LGALS9O00182 355 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 CHST10O43529 356 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 IMPA1P29218 277 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 RPL5P46777 297 aaKnown RBP3.89□□□□□ -1.79
USP47-204ENST00000525078 OR1E2P47887 323 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 ZNF136P52737 540 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 RIPPLY3P57055 190 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 TAS2R41P59536 307 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 LYZP61626 148 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 RAP1AP62834 184 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 PRDX4Q13162 271 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 ACOT6Q3I5F7 207 aaPredicted RBP3.89□□□□□ -1.79
USP47-204ENST00000525078 ZCWPW2Q504Y3 356 aa3.89□□□□□ -1.79
USP47-204ENST00000525078 HENMT1Q5T8I9 393 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms