RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 STK40Q8N2I9 435 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OSR2Q8N2R0 312 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 LINC00469Q8N7U9 141 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 TMEM105Q8N8V8 129 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 APCDD1LQ8NCL9 501 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OR4M2Q8NGB6 313 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OR52K1Q8NGK4 314 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OR10Z1Q8NGY1 313 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OR1L1Q8NH94 360 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 C17orf50Q8WW18 174 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 ING5Q8WYH8 240 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 Q96MT0 163 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 C1orf50Q9BV19 199 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 NUDT9Q9BW91 350 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 SCRT1Q9BWW7 348 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 BBS2Q9BXC9 721 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 ULBP2Q9BZM5 246 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 FAM96AQ9H5X1 160 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 FBXO5Q9UKT4 447 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 CES1P1Q9UKY3 287 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 HS3ST2Q9Y278 367 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 RHBDD3Q9Y3P4 386 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 OR51B4Q9Y5P0 310 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 COMMD3-BMI1R4GMX3 469 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 DENND4CQ5VZ89 1909 aa2.22□□□□□ -2.05
SKP1-212ENST00000523966 ANKRD12Q6UB98 2062 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MYO10Q9HD67 2058 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 A0A1W2PRF3 423 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 A0A1W2PRM7 423 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 BANF1O75531 89 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 ZMPSTE24O75844 475 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 VAPBO95292 243 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MBP02144 154 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 RBP1P09455 135 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 OGNP20774 298 aaKnown RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 CD9P21926 228 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 PRKACBP22694 351 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 RPA3P35244 121 aaPredicted RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 CSKP41240 450 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 CCR2P41597 374 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MAGEA12P43365 314 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 CD151P48509 253 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TTPAP49638 278 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TAS2R39P59534 338 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MAXP61244 160 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 ATP6V0D1P61421 351 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 OR1Q1Q15612 314 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 ZNF470Q6ECI4 717 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TPGS1Q6ZTW0 290 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 GLT6D1Q7Z4J2 308 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TMEM25Q86YD3 366 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 C4orf33Q8N1A6 199 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 WDR31Q8NA23 367 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 OR6K6Q8NGW6 343 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TCP10LQ8TDR4 215 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 ZNF721Q8TF20 911 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 FGF13Q92913 245 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 KIAA1143Q96AT1 154 aaPredicted RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 ZNF707Q96C28 371 aaPredicted RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 TCEAL4Q96EI5 215 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 GPR82Q96P67 336 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 TRIB3Q96RU7 358 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 LYSMD1Q96S90 227 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 GPR22Q99680 433 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 PAIP2Q9BPZ3 127 aaKnown RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 MRPL57Q9BQC6 102 aaKnown RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 SIKE1Q9BRV8 207 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MFSD1Q9H3U5 465 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 NLE1Q9NVX2 485 aaPredicted RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 TAS2R13Q9NYV9 303 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 NDRG2Q9UN36 371 aaKnown RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 FARSAQ9Y285 508 aaKnown RBP2.21□□□□□ -2.06
SKP1-212ENST00000523966 ARL2BPQ9Y2Y0 163 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 ACOT9Q9Y305 439 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 DOCK8Q8NF50 2099 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 PIKFYVEQ9Y2I7 2098 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
SKP1-212ENST00000523966 CABIN1Q9Y6J0 2220 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 IGKV1-27A0A075B6S5 117 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 GOLGA8QA0A0J9YX86 632 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 A0A0J9YYE9 177 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 C1orf232A0A0U1RR37 186 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ISPDA4D126 451 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 BOLA2-SMG1P6H3BVE0 249 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 GOLGA8RI6L899 631 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PRMT5O14744 637 aaPredicted RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 PSPHP1O15172 72 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 CTNSO60931 367 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 PIAS1O75925 651 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 DCTN3O75935 186 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ATP5HO75947 161 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 KLHL2O95198 593 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 TRBC1P01850 177 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 C1QAP02745 245 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 SERPINE1P05121 402 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 BPGMP07738 259 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 SLC35G6P0C7Q6 338 aa2.2□□□□□ -2.06
SKP1-212ENST00000523966 ZNF7P17097 686 aaPredicted RBP2.2□□□□□ -2.06
SKP1-212ENST00000523966 TAC1P20366 129 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms