RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 ZNF254O75437 659 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 E2F6O75461 281 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 HLA-DRB1P01911 266 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 ZNF44P15621 663 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 BLVRBP30043 206 aaPredicted RBP10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 Q6P435 159 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 ZNF679Q8IYX0 411 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 ZNF565Q8N9K5 539 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 BORCS8Q96FH0 119 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 SPACA5Q96QH8 159 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 KCTD14Q9BQ13 255 aaPredicted RBP10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 NEURL2Q9BR09 285 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 WFDC10AQ9H1F0 79 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 KIF25Q9UIL4 384 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 GTF2A1LQ9UNN4 478 aa10.48□□□□□ -0.73
NKX3-1-202ENST00000523261 DNAH17Q9UFH2 4485 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 A0A1W2PN81 502 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 LOC110117498-PIK3R3F6TDL0 507 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 CYB5AP00167 134 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 C21orf33P30042 268 aaPredicted RBP10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 CHRNA7P36544 502 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 RIDAP52758 137 aaKnown RBP10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 TNFRSF9Q07011 255 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 SCN1BQ07699 218 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 BCL2L15Q5TBC7 163 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 GLYATQ6IB77 296 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 LINC00311Q8N616 119 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 OR51T1Q8NGJ9 327 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 OR9G4Q8NGQ1 327 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 KCTD12Q96CX2 325 aaKnown RBP10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 PYURFQ96I23 114 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 SRD5A3Q9H8P0 318 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 TMBIM4Q9HC24 238 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 SAR1AQ9NR31 198 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 FOXA2Q9Y261 457 aaPredicted RBP10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 FBXO7Q9Y3I1 522 aa10.47□□□□□ -0.73
NKX3-1-202ENST00000523261 MEIKINA0A087WXM9 373 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 PRODHO43272 600 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 CD7P09564 240 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 CCL1P22362 96 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 VHLP40337 213 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 HMGA2P52926 109 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 NDPQ00604 133 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 KLF5Q13887 457 aaPredicted RBP10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 MMDQ15546 238 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 ECSCRQ19T08 205 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 IQCF1Q8N6M8 205 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 CHST4Q8NCG5 386 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 OR10A7Q8NGE5 316 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 RHOVQ96L33 236 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 TTTY10Q9BZA0 68 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 YIPF3Q9GZM5 350 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 CHST5Q9GZS9 411 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 NCOR1P1Q9H4R4 102 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 MOB1AQ9H8S9 216 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 MRGBPQ9NV56 204 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 ETAA1Q9NY74 926 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 OR52A1Q9UKL2 312 aa10.46□□□□□ -0.73
NKX3-1-202ENST00000523261 PKD1P98161 4303 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 IGKV1-12A0A0C4DH73 117 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 GATBO75879 557 aaKnown RBP10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 IGKV1D-12P01611 117 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 FABP3P05413 133 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 ZP3P21754 424 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 FASP25445 335 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 SSTR5P35346 364 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 RBP2P50120 134 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 C8orf82Q6P1X6 216 aaPredicted RBP10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 AQP11Q8NBQ7 271 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 SIKE1Q9BRV8 207 aa10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 V9GYY5 206 aaPredicted RBP10.45□□□□□ -0.74
NKX3-1-202ENST00000523261 OR11H12B2RN74 326 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 NDUFB8O95169 186 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 TFAP2AP05549 437 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 CSN3P07498 182 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 ATF4P18848 351 aaPredicted RBP10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 MECP2P51608 486 aaKnown RBP10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 ATP1B3P54709 279 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 PDZK1IP1Q13113 114 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 LYG2Q86SG7 212 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 DNAAF1Q8NEP3 725 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 BBS1Q8NFJ9 593 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 DYDC1Q8WWB3 177 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 MCUR1Q96AQ8 359 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 HOPXQ9BPY8 73 aaPredicted RBP10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 ANKRD60Q9BZ19 345 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 RANGRFQ9HD47 186 aaPredicted RBP10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 IKZF2Q9UKS7 526 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 R4GMQ9 66 aa10.44□□□□□ -0.74
NKX3-1-202ENST00000523261 HSPB6O14558 160 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 DEGS1O15121 323 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 TXNL1O43396 289 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 KRT36O76013 467 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 KDM4BO94953 1096 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 SLC2A5P22732 501 aa10.43□□□□□ -0.74
NKX3-1-202ENST00000523261 IL3RAP26951 378 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms