RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 HSPB6O14558 160 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 MPZL2O60487 215 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 SAP30O75446 220 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 DCTN3O75935 186 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 OR2H2O95918 312 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 IGLV3-1P01715 115 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CSTBP04080 98 aaKnown RBP4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ELANEP08246 267 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CALCBP10092 127 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ANXA8P13928 327 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 HOXB6P17509 224 aaKnown RBP4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CD34P28906 385 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 C21orf33P30042 268 aaPredicted RBP4.9□□□□□ -1.63
PABPC1-220ENST00000522658 OR3A1P47881 315 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ERVK11-1P61568 191 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 AESQ08117 197 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 TMEM42Q69YG0 159 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ZFAND6Q6FIF0 208 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 PLEKHG7Q6ZR37 379 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 C18orf65Q6ZTR6 163 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 KRT74Q7RTS7 529 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 TCF23Q7RTU1 214 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 THNSL2Q86YJ6 484 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ARHGAP24Q8N264 748 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ZNF565Q8N9K5 539 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 OR6Q1Q8NGQ2 317 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 C4orf3Q8WVX3 66 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 SPSB1Q96BD6 273 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CCDC124Q96CT7 223 aaKnown RBP4.9□□□□□ -1.63
PABPC1-220ENST00000522658 C10orf35Q96D05 121 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 RAX2Q96IS3 184 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CLUHP3Q96NS8 147 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 TBX5Q99593 518 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 APOL4Q9BPW4 351 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 DCLRE1BQ9H816 532 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 ISYNA1Q9NPH2 558 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 CLN6Q9NWW5 311 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 MTCH1Q9NZJ7 389 aa4.9□□□□□ -1.63
PABPC1-220ENST00000522658 MEIKINA0A087WXM9 373 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 LCE6AA0A183 80 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 LOC107986453A0A1B0GWG9 222 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 J3QR06 171 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 CCRL2O00421 344 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 HSD17B6O14756 317 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 DEGS1O15121 323 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 MAGEB3O15480 346 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 ENTPD6O75354 484 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 MMP23AO75900 390 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 IGLV1-47P01700 117 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 GAPDHP04406 335 aaKnown RBP4.89□□□□□ -1.63
PABPC1-220ENST00000522658 HCKP08631 526 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 SLC2A5P22732 501 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 GLIPR1P48060 266 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 ZNF616Q08AN1 781 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 KIR2DS1Q14954 304 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 ZNF146Q15072 292 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 SRSF7Q16629 238 aaKnown RBP eCLIP4.89□□□□□ -1.63
PABPC1-220ENST00000522658 PAN3Q58A45 887 aaKnown RBP4.89□□□□□ -1.63
PABPC1-220ENST00000522658 BAIAP2L2Q6UXY1 529 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 ZNF429Q86V71 674 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 TGIF2LXQ8IUE1 241 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 DNAAF1Q8NEP3 725 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 OR11H1Q8NG94 326 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 OR52N4Q8NGI2 321 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 OR2T10Q8NGZ9 312 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 RFT1Q96AA3 541 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 MRPL48Q96GC5 212 aaKnown RBP4.89□□□□□ -1.63
PABPC1-220ENST00000522658 OPALINQ96PE5 141 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 BARHL1Q9BZE3 327 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 FAM192AQ9GZU8 254 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 RHOFQ9HBH0 211 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 SLC25A19Q9HC21 320 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 RAB9BQ9NP90 201 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 CALYQ9NYX4 217 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 IDI2-AS1Q9NZ38 188 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 IL36RNQ9UBH0 155 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 DKK2Q9UBU2 259 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 ENOPH1Q9UHY7 261 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 GNG8Q9UK08 70 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 LSM4Q9Y4Z0 139 aaKnown RBP4.89□□□□□ -1.63
PABPC1-220ENST00000522658 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
PABPC1-220ENST00000522658 KBTBD11-OT1A0A1B0GTJ5 212 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 METTL15A6NJ78 407 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 H0YJX3 145 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 TXNL1O43396 289 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 SCAF4O95104 1147 aaKnown RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 IL1AP01583 271 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 IGHV3-7P01780 117 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 IGHG2P01859 326 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 AMY1AP04745 511 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 IFNA6P05013 189 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 CSN2P05814 226 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 DBTP11182 482 aaKnown RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 CCL1P22362 96 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 MYF6P23409 242 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 SOX6P35712 828 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 GPR12P47775 334 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 CDX1P47902 265 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-220ENST00000522658 NPBWR2P48146 333 aa4.88□□□□□ -1.63
PABPC1-220ENST00000522658 ISL1P61371 349 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms