RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 ACOD1A6NK06 481 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 NDUFB8O95169 186 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 CYB5AP00167 134 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 IL1AP01583 271 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 CGB3P0DN86 165 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 CGB7P0DN87 165 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 ZP3P21754 424 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 RRM2P31350 389 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 SSTR5P35346 364 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 NDPQ00604 133 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 RBMY1FQ15415 496 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 SPIN3Q5JUX0 258 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 RPL13AP3Q6NVV1 102 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 PLEKHG7Q6ZR37 379 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 Q8IYB0 196 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 RFT1Q96AA3 541 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 RHOVQ96L33 236 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 ANKRD60Q9BZ19 345 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 SEBOXQ9HB31 216 aaPredicted RBP8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 HMG20AQ9NP66 347 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 KRT84Q9NSB2 600 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 SLC23A1Q9UHI7 598 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 NUFIP1Q9UHK0 495 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 IKZF2Q9UKS7 526 aa8.3□□□□□ -1.08
CTNNA1-234ENST00000522227 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 IGHV3-43A0A0B4J1X8 118 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 PRR32B1ATL7 298 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 M0R2N4 97 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 MAGEB4O15481 346 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 MITFO75030 526 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 NPPAP01160 153 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 IGHV3-43DP0DP04 118 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 C21orf33P30042 268 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 FUT6P51993 359 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 ZNF45Q02386 682 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 KLF5Q13887 457 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 ZNF829Q3KNS6 432 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 CD300EQ496F6 205 aaPredicted RBP8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 BCL2L15Q5TBC7 163 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 IQCF1Q8N6M8 205 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 ZNF565Q8N9K5 539 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 DNAAF1Q8NEP3 725 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 OR2T33Q8NG76 320 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 RITA1Q96K30 269 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 GGTLC1Q9BX51 225 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 IL20Q9NYY1 176 aa8.29□□□□□ -1.08
CTNNA1-234ENST00000522227 A0A1B0GTI1 187 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 ZNF785A8K8V0 405 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 LOC110117498-PIK3R3F6TDL0 507 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 SLC33A1O00400 549 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 DEGS1O15121 323 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 ARPC1BO15143 372 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 RTL8CO15255 209 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 TRGV3P03979 118 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 MRPL3P09001 348 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 ALOX5APP20292 161 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 RPS7P62081 194 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 DEFA5Q01523 94 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 SF3A3Q12874 501 aaKnown RBP eCLIP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 RASSF6Q6ZTQ3 369 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 RDH10Q8IZV5 341 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 TCEANCQ8N8B7 351 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 BTBD10Q9BSF8 475 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 FAM103A1Q9BTL3 118 aaKnown RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 MROQ9BYG7 248 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 RANGRFQ9HD47 186 aaPredicted RBP8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 CMC2Q9NRP2 79 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 ZNF355PQ9NSJ1 428 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 ERGIC3Q9Y282 383 aa8.28□□□□□ -1.08
CTNNA1-234ENST00000522227 LOC102724200A0A096LPH7 203 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 A0A0G2JND7 137 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 BBIP1A8MTZ0 92 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 NME4O00746 187 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 SLC31A2O15432 143 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 SPRY2O43597 315 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 GASTP01350 101 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 HLA-DRB1P01911 266 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 CSN2P05814 226 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 IL3RAP26951 378 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 RIDAP52758 137 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 ATP1B3P54709 279 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 ACTBP60709 375 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 APOFQ13790 326 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 C19orf54Q5BKX5 351 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 LIN54Q6MZP7 749 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 Q6P435 159 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 ZNF645Q8N7E2 425 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 RCN3Q96D15 328 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 NR1H4Q96RI1 486 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 ZNF251Q9BRH9 671 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 DGCR6LQ9BY27 220 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 CNOT2Q9NZN8 540 aaKnown RBP8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 OR52A1Q9UKL2 312 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 BAIAP2Q9UQB8 552 aa8.27□□□□□ -1.09
CTNNA1-234ENST00000522227 IGKV1-12A0A0C4DH73 117 aa8.26□□□□□ -1.09
CTNNA1-234ENST00000522227 C13orf42A0A1B0GVH6 325 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms