RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RPEL1Q2QD12 228 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 LYG1Q8N1E2 194 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 TMEM171Q8WVE6 324 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 SRP14P37108 136 aaKnown RBP14.19□□□□□ -0.14
USP42-207ENST00000521713 CEACAM6P40199 344 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 INSL4Q14641 139 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 COL19A1Q14993 1142 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 ZNF770Q6IQ21 691 aaPredicted RBP14.19□□□□□ -0.14
USP42-207ENST00000521713 TMEM56Q96MV1 263 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 PPP1R3EQ9H7J1 279 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 ARG1P05089 322 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 CRISP2P16562 243 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 ELOBQ15370 118 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 UBE2V2Q15819 145 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 OR10V1Q8NGI7 309 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 TMEM191AQ9H0A3 160 aa14.19□□□□□ -0.14
USP42-207ENST00000521713 SLC38A11Q08AI6 406 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 RPS4Y2Q8TD47 263 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 SLC2A9Q9NRM0 540 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 RNF7Q9UBF6 113 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 NCBP2LA6PVI3 153 aaKnown RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 DXOO77932 396 aaKnown RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 NMBP08949 121 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 HIKESHIQ53FT3 197 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 DYRK2Q92630 601 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 TMEM230Q96A57 120 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 MEGF10Q96KG7 1140 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 SLC45A2Q9UMX9 530 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 TNFSF18Q9UNG2 199 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 LSM2Q9Y333 95 aaKnown RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 STAG3L2P0CL84 134 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 COX6A1P12074 109 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 MMP16P51512 607 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 PDCD1Q15116 288 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 FFAR4Q5NUL3 377 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 COL5A1-AS1Q5SY13 56 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 TSPO2Q5TGU0 170 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 OR8B3Q8NGG8 313 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 IL22RA2Q969J5 263 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 ZNF385AQ96PM9 386 aaKnown RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 OR8B2Q96RD0 313 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 SPSB2Q99619 263 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 WDR61Q9GZS3 305 aaKnown RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 MS4A7Q9GZW8 240 aaPredicted RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 ERVH48-1M5A8F1 160 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 AMTP48728 403 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 C10orf111Q8N326 155 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 FAAP24Q9BTP7 215 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 GHITMQ9H3K2 345 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 CNTD2Q9H8S5 307 aa14.18□□□□□ -0.14
USP42-207ENST00000521713 ERRFI1Q9UJM3 462 aaPredicted RBP14.18□□□□□ -0.14
USP42-207ENST00000521713 TRPM7Q96QT4 1865 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 J3QT63 122 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 OR5G3P0C626 314 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 OR3A4PP47883 348 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 ZNF816Q0VGE8 651 aaPredicted RBP14.17□□□□□ -0.14
USP42-207ENST00000521713 DPPA3Q6W0C5 159 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 MYPOPQ86VE0 399 aaPredicted RBP14.17□□□□□ -0.14
USP42-207ENST00000521713 UBTD1Q9HAC8 227 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 KIAA1324LA8MWY0 1029 aaPredicted RBP14.17□□□□□ -0.14
USP42-207ENST00000521713 FAM27BQ5VT28 67 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 WNT2BQ93097 391 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 ISOC2Q96AB3 205 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 IL17BQ9UHF5 180 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 CNOT1A5YKK6 2376 aaKnown RBP14.17□□□□□ -0.14
USP42-207ENST00000521713 SCN3AQ9NY46 2000 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 C3orf85A0A1B0GTC6 90 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 IFITM2Q01629 132 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 LRP11Q86VZ4 500 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 ZNF552Q9H707 407 aaPredicted RBP14.17□□□□□ -0.14
USP42-207ENST00000521713 PRSS50Q9UI38 385 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 ARID1AO14497 2285 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 H3BP45 60 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 PCOLCEQ15113 449 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 TMEM97Q5BJF2 176 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 C20orf196Q8IYI0 205 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 OR5A2Q8NGI9 324 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 TINAGQ9UJW2 476 aa14.17□□□□□ -0.14
USP42-207ENST00000521713 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 SERTM2A0A1B0GWG4 89 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 MFSD2BA6NFX1 497 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 ACAA1P09110 424 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 DLK1P80370 383 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 PAX5Q02548 391 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 FOXO1Q12778 655 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 RNASEKQ6P5S7 137 aaKnown RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 ADTRPQ96IZ2 230 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 EP300Q09472 2414 aaPredicted RBP14.16□□□□□ -0.14
USP42-207ENST00000521713 CDK2AP1O14519 115 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 COX7A2P2O60397 106 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 IGF2P01344 180 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 ASCL5Q7RTU5 278 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 C6orf201Q7Z4U5 140 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 SNX22Q96L94 193 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 PSG11Q9UQ72 335 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 NAT2P11245 290 aa14.16□□□□□ -0.14
USP42-207ENST00000521713 KIR2DS2P43631 304 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms