RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 BSXQ3C1V8 233 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 Q3ZCU0 254 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 CLEC20AQ6ZU45 233 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 OLIG3Q7RTU3 272 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 HS3ST5Q8IZT8 346 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 REEP6Q96HR9 211 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 CACNA1DQ01668 2161 aa1.91□□□□□ -2.1
SQLE-202ENST00000518604 TRAV8-2A0A0B4J237 113 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 ZNF73O43830 326 aaPredicted RBP1.9□□□□□ -2.11
SQLE-202ENST00000518604 SH2D1AO60880 128 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 ETV1P50549 477 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 CST6Q15828 149 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 LAIR2Q6ISS4 152 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 DGAT2L6Q6ZPD8 337 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 LRRC6Q86X45 466 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 KRTCAP2Q8N6L1 136 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 FAM45AQ8TCE6 357 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 C20orf166-AS1Q96NR2 134 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 CATSPER2Q96P56 530 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 EBPLQ9BY08 206 aa1.9□□□□□ -2.11
SQLE-202ENST00000518604 USP42Q9H9J4 1324 aaKnown RBP1.9□□□□□ -2.11
SQLE-202ENST00000518604 IGHV3OR15-7A0A075B7D8 119 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 SDHAF1A6NFY7 115 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 ZNF879B4DU55 563 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 G3V3Q6 166 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 C3orf84H3BNL1 204 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 LDOC1O95751 146 aaPredicted RBP1.89□□□□□ -2.11
SQLE-202ENST00000518604 FADS2O95864 444 aaKnown RBP1.89□□□□□ -2.11
SQLE-202ENST00000518604 SPNP16150 400 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 ZNF3P17036 446 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 AKR1C4P17516 323 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 HSPA13P48723 471 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 INPP1P49441 399 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 C10orf91Q5T1B1 145 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 ELP2Q6IA86 826 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 GATD1Q8NB37 220 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 KCTD4Q8WVF5 259 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 OR5P2Q8WZ92 322 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 OR8B2Q96RD0 313 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 BCL2L14Q9BZR8 327 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 RPUSD1Q9UJJ7 312 aaKnown RBP1.89□□□□□ -2.11
SQLE-202ENST00000518604 SYNRGQ9UMZ2 1314 aa1.89□□□□□ -2.11
SQLE-202ENST00000518604 PLXNB1O43157 2135 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 CBR1P16152 277 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 S100A2P29034 98 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 EVI2BP34910 448 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 UBE2KP61086 200 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 STX3Q13277 289 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 AHSA2Q719I0 299 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 SPPL2BQ8TCT7 592 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 GTF2H4Q92759 462 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 HIST1H2BAQ96A08 127 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 FAAP24Q9BTP7 215 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 TAPBPLQ9BX59 468 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 ARL6Q9H0F7 186 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 IFT46Q9NQC8 304 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 AGPAT3Q9NRZ7 376 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 MRPL16Q9NX20 251 aaKnown RBP1.88□□□□□ -2.11
SQLE-202ENST00000518604 LINC00588Q9Y4M8 146 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 TBL2Q9Y4P3 447 aaKnown RBP1.88□□□□□ -2.11
SQLE-202ENST00000518604 PHLDA3Q9Y5J5 127 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 CEP170Q5SW79 1584 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 ABCB11O95342 1321 aa1.88□□□□□ -2.11
SQLE-202ENST00000518604 MYO15BQ96JP2 1530 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 A0A1B0GTI1 187 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 ARGFXA6NJG6 315 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 LECT2O14960 151 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 FGF16O43320 207 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
SQLE-202ENST00000518604 AQP5P55064 265 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 FLOT2Q14254 428 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 PAFAH1B3Q15102 231 aaKnown RBP1.87□□□□□ -2.11
SQLE-202ENST00000518604 SPIN4Q56A73 249 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 SSX7Q7RTT5 188 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 OR4A5Q8NH83 315 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 PGLYRP3Q96LB9 341 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 TSSK6Q9BXA6 273 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 SLC23A2Q9UGH3 650 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 MRM2Q9UI43 246 aaKnown RBP1.87□□□□□ -2.11
SQLE-202ENST00000518604 BTRCQ9Y297 605 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 SNX24Q9Y343 169 aa1.87□□□□□ -2.11
SQLE-202ENST00000518604 EEF1E1O43324 174 aaKnown RBP1.86□□□□□ -2.11
SQLE-202ENST00000518604 DENRO43583 198 aaKnown RBP1.86□□□□□ -2.11
SQLE-202ENST00000518604 NQO2P16083 231 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 ATF1P18846 271 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 LCN1P31025 176 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 OR4D1Q15615 310 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 ZNF322Q6U7Q0 402 aaPredicted RBP1.86□□□□□ -2.11
SQLE-202ENST00000518604 TMEM25Q86YD3 366 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 OR10D4PQ8NGN7 298 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 RORBQ92753 470 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 HBEGFQ99075 208 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 PRSS27Q9BQR3 290 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 ALX4Q9H161 411 aaPredicted RBP1.86□□□□□ -2.11
SQLE-202ENST00000518604 KCNIP2Q9NS61 270 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 VPREB3Q9UKI3 123 aa1.86□□□□□ -2.11
SQLE-202ENST00000518604 RAB3GAP2Q9H2M9 1393 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 TRIOBPQ9H2D6 2365 aa1.85□□□□□ -2.11
SQLE-202ENST00000518604 A0A1B0GX12 115 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms