RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SLC30A8Q8IWU4 369 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 CPNE9Q8IYJ1 553 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RDH10Q8IZV5 341 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 C6orf223Q8N319 242 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR2L13Q8N349 312 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PNKDQ8N490 385 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FAM71E2Q8N5Q1 922 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR2M7Q8NG81 312 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR13D1Q8NGV5 346 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR10K1Q8NGX5 313 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR8U1Q8NH10 309 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR5B3Q8NH48 314 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 OR51Q1Q8NH59 317 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MCFD2Q8NI22 146 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 Q8WTZ3 238 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 IL22RA2Q969J5 263 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 YIPF5Q969M3 257 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TAMM41Q96BW9 452 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MRAP2Q96G30 205 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MRPL48Q96GC5 212 aaKnown RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 AURKBQ96GD4 344 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PAGE5Q96GU1 130 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 CNBD2Q96M20 576 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM56Q96MV1 263 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SCGB3A2Q96PL1 93 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SORT1Q99523 831 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 C12orf57Q99622 126 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PDCD1LG2Q9BQ51 273 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MIXL1Q9H2W2 232 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ZSCAN16Q9H4T2 348 aaPredicted RBP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PRORYQ9H606 182 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TMEM38AQ9H6F2 299 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 TPT1P8Q9HAU6 139 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 HMG20AQ9NP66 347 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ACP6Q9NPH0 428 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 DOK5Q9P104 306 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PRO0461Q9UI25 63 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RAB22AQ9UL26 194 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 NEU3Q9UQ49 428 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ANGPT4Q9Y264 503 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.37□□□□□ -2.03
VPS13B-207ENST00000518569 PRELID3BQ9Y3B1 194 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 ALG5Q9Y673 324 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 NOTCH2Q04721 2471 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 IQGAP3Q86VI3 1631 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 C1orf167Q5SNV9 1468 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 FYCO1Q9BQS8 1478 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 MBD5Q9P267 1494 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 NRCAMQ92823 1304 aa2.37□□□□□ -2.03
VPS13B-207ENST00000518569 RFX7Q2KHR2 1363 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 DISP2A7MBM2 1401 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ADAMTS13Q76LX8 1427 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 YTHDC2Q9H6S0 1430 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PHRF1Q9P1Y6 1649 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 BTAF1O14981 1849 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 A0A1B0GV50 99 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PQLC2LA1A4F0 135 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 NKX2-6A6NCS4 301 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 LINC00587B1AMM8 73 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ANKRD63C9JTQ0 380 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 GPR31O00270 319 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TNFRSF11BO00300 401 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TXNDC9O14530 226 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 TAAR5O14804 337 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 AZIN1O14977 448 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 MRPS12O15235 138 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SLC22A1O15245 554 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 EIF1BO60739 113 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PDYNP01213 254 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 INSP01308 110 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SERPINA7P05543 415 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 FBP1P09467 338 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SULT1A3P0DMM9 295 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SULT1A4P0DMN0 295 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CT45A6P0DMU7 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CT45A5P0DMU8 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CT45A7P0DMV0 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 LIPCP11150 499 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CD99P14209 185 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 ATF1P18846 271 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RPL12P30050 165 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CCR7P32248 378 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PHBP35232 272 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 EIF1P41567 113 aaKnown RBP2.36□□□□□ -2.03
VPS13B-207ENST00000518569 HCAR3P49019 387 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RAB13P51153 203 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RORCP51449 518 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 RAB38P57729 211 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 OR12D2P58182 307 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 KRTAP10-8P60410 259 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 SP4Q02446 784 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 APOFQ13790 326 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 GUSBP1Q15486 140 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 NRF1Q16656 503 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 HLA-DRB5Q30154 266 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 PARP15Q460N3 678 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CT45A1Q5HYN5 189 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 FAM78BQ5VT40 261 aa2.36□□□□□ -2.03
VPS13B-207ENST00000518569 CYB5R2Q6BCY4 276 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms