RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 RANBP3Q9H6Z4 567 aaPredicted RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 RNF7Q9UBF6 113 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 WIPI2Q9Y4P8 454 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 OR2A4O95047 310 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 DUS4LO95620 317 aaKnown RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 GIPP09681 153 aaPredicted RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 EGR1P18146 543 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 CEBPDP49716 269 aaPredicted RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 HLA-DRB3P79483 266 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 SNTB1Q13884 538 aaKnown RBP16.92■□□□□ 0.3
TRIO-223ENST00000515710 IGSF11Q5DX21 431 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 NLRC3Q7RTR2 1065 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 Q8TCH9 128 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 OR2A7Q96R45 310 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 PHB2Q99623 299 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 TMPRSS13Q9BYE2 586 aa16.92■□□□□ 0.3
TRIO-223ENST00000515710 PSPNO60542 156 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 SLC22A5O76082 557 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 TK1P04183 234 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 ZNF728P0DKX0 622 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 TNFRSF1AP19438 455 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 APOBEC3AP31941 199 aaPredicted RBP16.91■□□□□ 0.3
TRIO-223ENST00000515710 PRDX2P32119 198 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 SEC61A1P61619 476 aaKnown RBP16.91■□□□□ 0.3
TRIO-223ENST00000515710 BAMBIQ13145 260 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 SLC35E4Q6ICL7 350 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 OR11L1Q8NGX0 322 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 ASB13Q8WXK3 278 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 MOB3AQ96BX8 217 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 HYLS1Q96M11 299 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 CLEC4MQ9H2X3 399 aaPredicted RBP16.91■□□□□ 0.3
TRIO-223ENST00000515710 GCM1Q9NP62 436 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 DNAJB11Q9UBS4 358 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 TRAPPC2LQ9UL33 140 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 PCDHB10Q9UN67 800 aa16.91■□□□□ 0.3
TRIO-223ENST00000515710 M0R233 179 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 SFT2D2O95562 160 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 DIRAS3O95661 229 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 PSG2P11465 335 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 VAMP1P23763 118 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 HERV-K104P61576 105 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 COL10A1Q03692 680 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 TFF3Q07654 80 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 ZNF808Q8N4W9 903 aaPredicted RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 FXYD6Q9H0Q3 95 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 MBNL3Q9NUK0 354 aaKnown RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 SLC23A1Q9UHI7 598 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 RNF115Q9Y4L5 304 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 TMEM30CPA0ZSE6 113 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 GOSR2O14653 212 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 RCC1P18754 421 aaPredicted RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 AGAP20933 346 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 RAP2BP61225 183 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 TAGLNQ01995 201 aaKnown RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 TLE1Q04724 770 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 ATXN7L3Q14CW9 347 aaPredicted RBP16.9■□□□□ 0.3
TRIO-223ENST00000515710 TESK1Q15569 626 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 EFNB3Q15768 340 aa16.9■□□□□ 0.3
TRIO-223ENST00000515710 A0A0B4J2A0 478 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 LINC00862A6NCI5 91 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 SMLR1H3BR10 107 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 PPYP01298 95 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 HLA-GP17693 338 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 PI3P19957 117 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 GNLYP22749 145 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 AADACP22760 399 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 HOXA4Q00056 320 aaPredicted RBP16.89■□□□□ 0.29
TRIO-223ENST00000515710 C2orf68Q2NKX9 166 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 LPCAT3Q6P1A2 487 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 BOLLQ8N9W6 283 aaKnown RBP16.89■□□□□ 0.29
TRIO-223ENST00000515710 PIK3IP1Q96FE7 263 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 CABLES2Q9BTV7 478 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 PIPOXQ9P0Z9 390 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 SHPKQ9UHJ6 478 aa16.89■□□□□ 0.29
TRIO-223ENST00000515710 BET1O15155 118 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 IRF2P14316 349 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 NFYAP23511 347 aaPredicted RBP16.88■□□□□ 0.29
TRIO-223ENST00000515710 HERPUD1Q15011 391 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 C11orf88Q6PI97 169 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CD177Q8N6Q3 437 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 OR5T2Q8NGG2 359 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 PPP1R35Q8TAP8 253 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 FAM222BQ8WU58 562 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 TOMM40LQ969M1 308 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CHIAQ9BZP6 476 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 EGLN1Q9GZT9 426 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 MS4A5Q9H3V2 200 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 PPP1R3CQ9UQK1 317 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CADP27708 2225 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 B9A039 149 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 OR3A1P47881 315 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 FXYD4P59646 89 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 PAX5Q02548 391 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 LIN54Q6MZP7 749 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CLEC18BQ6UXF7 455 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 CASTOR1Q8WTX7 329 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 NEUROG1Q92886 237 aa16.88■□□□□ 0.29
TRIO-223ENST00000515710 SNX22Q96L94 193 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms