RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 OLFML2AQ68BL7 652 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 GLT8D1Q68CQ7 371 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 SLC35E4Q6ICL7 350 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 GLIPR1L1Q6UWM5 242 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 LHFPL4Q7Z7J7 247 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 ABHD12Q8N2K0 398 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 DTX3Q8N9I9 347 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 SUMF2Q8NBJ7 301 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 OR10A7Q8NGE5 316 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 SGMS2Q8NHU3 365 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CREB3L1Q96BA8 519 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 TMED9Q9BVK6 235 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 DPCDQ9BVM2 203 aaPredicted RBP10.35□□□□□ -0.75
CLCN3-210ENST00000515420 CCDC90BQ9GZT6 254 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 PPIL3Q9H2H8 161 aaKnown RBP10.35□□□□□ -0.75
CLCN3-210ENST00000515420 RCC2Q9P258 522 aaKnown RBP10.35□□□□□ -0.75
CLCN3-210ENST00000515420 KIF25Q9UIL4 384 aa10.35□□□□□ -0.75
CLCN3-210ENST00000515420 MEIKINA0A087WXM9 373 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 HSPB6O14558 160 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 DENRO43583 198 aaKnown RBP10.34□□□□□ -0.75
CLCN3-210ENST00000515420 MMP23AO75900 390 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 IL1AP01583 271 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 IGLV1-47P01700 117 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 GLAP06280 429 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 SRMP19623 302 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 OMGP23515 440 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 GLP1RP43220 463 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 GP2P55259 537 aaKnown RBP10.34□□□□□ -0.75
CLCN3-210ENST00000515420 DYNC1I2Q13409 638 aaKnown RBP10.34□□□□□ -0.75
CLCN3-210ENST00000515420 INSL4Q14641 139 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 HSD17B12Q53GQ0 312 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 C1orf100Q5SVJ3 147 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 PRAMEF5Q5TYX0 476 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 ZNF367Q7RTV3 350 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 LRRTM1Q86UE6 522 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 OR4P4Q8NGL7 312 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 PLPPR1Q8TBJ4 325 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 MGLLQ99685 303 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 CST11Q9H112 138 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 RANBP3Q9H6Z4 567 aaPredicted RBP10.34□□□□□ -0.75
CLCN3-210ENST00000515420 CALYQ9NYX4 217 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 PITPNC1Q9UKF7 332 aa10.34□□□□□ -0.75
CLCN3-210ENST00000515420 A0A1W2PP11 408 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM30CPA0ZSE6 113 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 NPIPB11E5RHQ5 1161 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 CA11O75493 328 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 ARL6IP5O75915 188 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 HSMCR30P0CW71 290 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 MGMTP16455 207 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 GZMHP20718 246 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 HTR1DP28221 377 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 RANBP1P43487 201 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 ARHGDIBP52566 201 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 RBM39Q14498 530 aaKnown RBP10.33□□□□□ -0.76
CLCN3-210ENST00000515420 LDLRAD2Q5SZI1 272 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 FAM27D1Q5T7N8 215 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 SLC16A12Q6ZSM3 486 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 Q6ZSV7 163 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 OR13A1Q8NGR1 328 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 LINC01006Q8NI28 216 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 NDNFQ8TB73 568 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 WFDC12Q8WWY7 111 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 KIRREL1Q96J84 757 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 Q96M66 194 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 YTHDF1Q9BYJ9 559 aaKnown RBP10.33□□□□□ -0.76
CLCN3-210ENST00000515420 ABCB10Q9NRK6 738 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 DPM3Q9P2X0 92 aa10.33□□□□□ -0.76
CLCN3-210ENST00000515420 OOSP1A8MZH6 123 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 GABRA5P31644 462 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 GDNFP39905 211 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 CEACAM3P40198 252 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 PRRX1P54821 245 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 SSX2Q16385 188 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 HLA-DRB5Q30154 266 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 ATAD3CQ5T2N8 411 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 C11orf88Q6PI97 169 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 ZNF497Q6ZNH5 498 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 TMEM91Q6ZNR0 172 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 SVOPQ8N4V2 548 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 OR9G1Q8NH87 305 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 TAF15Q92804 592 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLCN3-210ENST00000515420 RAB9BQ9NP90 201 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 ACOT13Q9NPJ3 140 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 ING3Q9NXR8 418 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 IDI2-AS1Q9NZ38 188 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 ZNF581Q9P0T4 197 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 FBLN5Q9UBX5 448 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 TCF19Q9Y242 345 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
CLCN3-210ENST00000515420 LEUTXA8MZ59 168 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 MCRIP1C9JLW8 97 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 TOR1AO14656 332 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 SLC22A1O15245 554 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 ORC5O43913 435 aa10.31□□□□□ -0.76
CLCN3-210ENST00000515420 CRTAPO75718 401 aaPredicted RBP10.31□□□□□ -0.76
CLCN3-210ENST00000515420 FUT3P21217 361 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms