RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 RIMS4Q9H426 269 aaPredicted RBP16.64■□□□□ 0.25
USP53-208ENST00000514305 RAB9BQ9NP90 201 aa16.64■□□□□ 0.25
USP53-208ENST00000514305 OR6C3Q9NZP0 311 aa16.64■□□□□ 0.25
USP53-208ENST00000514305 ADAM30Q9UKF2 790 aa16.64■□□□□ 0.25
USP53-208ENST00000514305 IGHV2-70DA0A0C4DH43 119 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 KIR2DS1A0A191URI9 304 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 A0A1B0GW55 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 PAHP00439 452 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 TFF1P04155 84 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L2P0CJ85 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L3P0CJ86 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L4P0CJ87 422 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L5P0CJ88 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L6P0CJ89 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L7P0CJ90 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 SELLP14151 372 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 EPHA1P21709 976 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 ZFP36P26651 326 aaKnown RBP16.63■□□□□ 0.25
USP53-208ENST00000514305 P2RX3P56373 397 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 PAX5Q02548 391 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 EDDM3AQ14507 147 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 UBE2NLQ5JXB2 153 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 NKAPLQ5M9Q1 402 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 SLC35E4Q6ICL7 350 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4L9Q6RFH8 374 aaPredicted RBP16.63■□□□□ 0.25
USP53-208ENST00000514305 ZNF565Q8N9K5 539 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 C8orf46Q8TAG6 207 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 RBM38Q9H0Z9 239 aaKnown RBP16.63■□□□□ 0.25
USP53-208ENST00000514305 RHBDL2Q9NX52 303 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 ETAA1Q9NY74 926 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 DUX4Q9UBX2 424 aa16.63■□□□□ 0.25
USP53-208ENST00000514305 WNK2Q9Y3S1 2297 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 TRGV10A0A0A0MS01 117 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 A0A0B4J203 849 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 TMEM30CPA0ZSE6 113 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 DPPA5A6NC42 116 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 HSPB6O14558 160 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 ACTG1P63261 375 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 FAM185AQ8N0U4 392 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 BPIFB2Q8N4F0 458 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 OR10R2Q8NGX6 335 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 RAB3CQ96E17 227 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 JMJD8Q96S16 334 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 KCNK15Q9H427 330 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 COMMD3Q9UBI1 195 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 INSIG2Q9Y5U4 225 aa16.62■□□□□ 0.25
USP53-208ENST00000514305 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 CHATP28329 748 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 ATXN7L3Q14CW9 347 aaPredicted RBP16.61■□□□□ 0.25
USP53-208ENST00000514305 METTL11BQ5VVY1 283 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 TRAPPC6BQ86SZ2 158 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 KIR3DL3Q8N743 410 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 LY6G5BQ8NDX9 201 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 DYNC2LI1Q8TCX1 351 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 NICN1Q9BSH3 213 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 TMPRSS13Q9BYE2 586 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 ABCG5Q9H222 651 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 UBE2J1Q9Y385 318 aaPredicted RBP16.61■□□□□ 0.25
USP53-208ENST00000514305 KPTNQ9Y664 436 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 LINC00312Q9Y6C7 94 aa16.61■□□□□ 0.25
USP53-208ENST00000514305 MEIKINA0A087WXM9 373 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 TRIM77I1YAP6 450 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 WIPF1O43516 503 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 AESQ08117 197 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 TRAT1Q6PIZ9 186 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 C1orf229Q6ZS94 237 aaPredicted RBP16.6■□□□□ 0.25
USP53-208ENST00000514305 C1orf122Q6ZSJ8 110 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 SAMD12Q8N8I0 201 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 OR4M1Q8NGD0 313 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 NANPQ8TBE9 248 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 GAL3ST2Q9H3Q3 398 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 TAS2R3Q9NYW6 316 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 MGAT4AQ9UM21 535 aa16.6■□□□□ 0.25
USP53-208ENST00000514305 ODAMA1E959 279 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 SERPINE3A8MV23 424 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 C22orf46C9J442 243 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 M0R1W7 72 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 SOCS1O15524 211 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 APOA1P02647 267 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 GZMHP20718 246 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 TALDO1P37837 337 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 EFNB2P52799 333 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 HILS1P60008 231 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 SIGIRRQ6IA17 410 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 C6orf201Q7Z4U5 140 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 OR5H6Q8NGV6 325 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 CORO2AQ92828 525 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 SUCNR1Q9BXA5 334 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 PECRQ9BY49 303 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 C7orf69Q9H7B7 122 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 CHMP1AQ9HD42 196 aaPredicted RBP16.59■□□□□ 0.25
USP53-208ENST00000514305 ONECUT1Q9UBC0 465 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 TRAPPC2LQ9UL33 140 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 AUP1Q9Y679 476 aa16.59■□□□□ 0.25
USP53-208ENST00000514305 A0A075B6Q4 140 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 UBE2QL1A1L167 161 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 RAB27BO00194 218 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 RGS5O15539 181 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 CD3GP09693 182 aa16.58■□□□□ 0.24
USP53-208ENST00000514305 MNDAP41218 407 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms