RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 DOCK9Q9BZ29 2069 aa1.18□□□□□ -2.22
RNF4-219ENST00000513450 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.18□□□□□ -2.22
RNF4-219ENST00000513450 NPHP4O75161 1426 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 IGHV6-1A0A0B4J1U7 121 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 TRAV8-4A0A0B4J246 113 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 A0A1B0GXF2 115 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 GOLGA6L4A6NEF3 574 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 RBFOX3A6NFN3 312 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 EVPLLA8MZ36 301 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 C8orf87E5RJ46 101 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SLC16A4O15374 487 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 DHRS3O75911 302 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 EPPINO95925 133 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 P01737 135 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 IGLV7-43P04211 117 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 CDK1P06493 297 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 OR4E1P0C645 316 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 OCM2P0CE71 109 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 CD28P10747 220 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SLC2A1P11166 492 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 NQO1P15559 274 aaKnown RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 PVALBP20472 110 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 PSMA1P25786 263 aaKnown RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 IL3RAP26951 378 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 IFNGR2P38484 337 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 CBX5P45973 191 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 REG1BP48304 166 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 DLX6P56179 175 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 TMEM33P57088 247 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 RAB38P57729 211 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 MTPNP58546 118 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 RAB8AP61006 207 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 RPS11P62280 158 aaKnown RBP eCLIP1.17□□□□□ -2.22
RNF4-219ENST00000513450 DYNLL1P63167 89 aaKnown RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 CCL7P80098 99 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 IL15RAQ13261 267 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SKP2Q13309 424 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 TAF1AQ15573 450 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 SNCBQ16143 134 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 HLA-DRB5Q30154 266 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 ACSM3Q53FZ2 586 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SPIN4Q56A73 249 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 PDZD11Q5EBL8 140 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 HHATQ5VTY9 493 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 KCTD16Q68DU8 428 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SPOPLQ6IQ16 392 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 DNM1P34Q6PK57 102 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 FAM19A5Q7Z5A7 132 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 SLC13A5Q86YT5 568 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 BBS7Q8IWZ6 715 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 C1orf64Q8NEQ6 169 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 GPR32P1Q8NGA4 272 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 OR5B17Q8NGF7 314 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 ERMNQ8TAM6 284 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 FAM45AQ8TCE6 357 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 RAB8BQ92930 207 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 PPCDCQ96CD2 204 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SPACA5Q96QH8 159 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 VAT1Q99536 393 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 APOL4Q9BPW4 351 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 SELENOSQ9BQE4 189 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 TBL1XR1Q9BZK7 514 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 ARL6Q9H0F7 186 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 LHX5Q9H2C1 402 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 DSN1Q9H410 356 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 FBXL15Q9H469 300 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 MAP1LC3AQ9H492 121 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 LINC00574Q9H8X3 128 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 XPNPEP1Q9NQW7 623 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 FKBP14Q9NWM8 211 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 ANXA10Q9UJ72 324 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 ZNF337Q9Y3M9 751 aa1.17□□□□□ -2.22
RNF4-219ENST00000513450 COL27A1Q8IZC6 1860 aaPredicted RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 NUP153P49790 1475 aaKnown RBP1.17□□□□□ -2.22
RNF4-219ENST00000513450 ZNF608Q9ULD9 1512 aaPredicted RBP1.16□□□□□ -2.22
RNF4-219ENST00000513450 TRAV8-6A0A0B4J262 113 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 IGKV2-24A0A0C4DH68 120 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 TMEM72A0PK05 275 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 SMIM9A6NGZ8 99 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 H0YJX3 145 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 KPNA3O00505 521 aaPredicted RBP1.16□□□□□ -2.22
RNF4-219ENST00000513450 PFDN6O15212 129 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 FABP7O15540 132 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 IGHV1-46P01743 117 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 REG1AP05451 166 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 CALB1P05937 261 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 IGKV4-1P06312 121 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 HIST1H1EP10412 219 aaKnown RBP1.16□□□□□ -2.22
RNF4-219ENST00000513450 GCLMP48507 274 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 CEBPGP53567 150 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 ARF6P62330 175 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 MRPS25P82663 173 aaKnown RBP1.16□□□□□ -2.22
RNF4-219ENST00000513450 FMODQ06828 376 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 BAXQ07812 192 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 ADIGQ0VDE8 80 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 PPP1R1AQ13522 171 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 ZNF235Q14590 738 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 SLC9A3R2Q15599 337 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 MOGQ16653 247 aa1.16□□□□□ -2.22
RNF4-219ENST00000513450 LRRC75BQ2VPJ9 315 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms