RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 RND1Q92730 232 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 GALMQ96C23 342 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 TAPBPLQ9BX59 468 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 SRMSQ9H3Y6 488 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 FLRT3Q9NZU0 649 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRODH2Q9UF12 536 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 ATMQ13315 3056 aa4.28□□□□□ -1.72
TRAPPC11-208ENST00000511955 SMG1Q96Q15 3661 aaKnown RBP4.28□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZFC3H1O60293 1989 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TRBV4-1A0A0J9YWV2 114 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TCRBV3S1A0A5B6 114 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DAPL1A0PJW8 107 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 D6RAR5 112 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 MFNGO00587 321 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DVL1O14640 695 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 HMGB3O15347 200 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 MRPS14O60783 128 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TNFSF15O95150 251 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 MT-CO3P00414 261 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 HBE1P02100 147 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 H2BFMP0C1H6 154 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 UBBP0CG47 229 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD37P11049 281 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PVRP15151 417 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 RPL35AP18077 110 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CRHBPP24387 322 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PIGAP37287 484 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 NUDT2P50583 147 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DVL1P1P54792 670 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF239Q16600 458 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CR1LQ2VPA4 569 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DCAF12Q5T6F0 453 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 C1orf195Q5TG92 126 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SFRP4Q6FHJ7 346 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM207Q6UWW9 146 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DND1Q8IYX4 353 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZADH2Q8N4Q0 377 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CBR4Q8N4T8 237 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 IQCF1Q8N6M8 205 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF439Q8NDP4 499 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TM4SF18Q96CE8 201 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 LRRC58Q96CX6 371 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PYURFQ96I23 114 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ADOQ96SZ5 270 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 EFCAB11Q9BUY7 163 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 HES7Q9BYE0 225 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DCSTAMPQ9H295 470 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 LHX9Q9NQ69 397 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 FBXL2Q9UKC9 423 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZFP30Q9Y2G7 519 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SPIN1Q9Y657 262 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 MAP1BP46821 2468 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PRRC2CQ9Y520 2896 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 APC2O95996 2303 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGHV5-10-1A0A0J9YXX1 117 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM166BA8MTA8 275 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 C1QAP02745 245 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CCL4P13236 92 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SFTPDP35247 375 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 APLNRP35414 380 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD96P40200 585 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 RORCP51449 518 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PDX1P52945 283 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 HCCSP53701 268 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 FOXG1P55316 489 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 NCS1P62166 190 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DEFA5Q01523 94 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CD164Q04900 197 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 GUCA2BQ16661 112 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCGB2B2Q4G0G5 96 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 CYBRD1Q53TN4 286 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 LARP4Q71RC2 724 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 C17orf82Q86X59 251 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 LYG1Q8N1E2 194 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 BEST3Q8N1M1 668 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 BPIFB2Q8N4F0 458 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PNLDC1Q8NA58 520 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR14A16Q8NHC5 309 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 MZB1Q8WU39 189 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 IL22RA2Q969J5 263 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SARAFQ96BY9 339 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF837Q96EG3 531 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF503Q96F45 646 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCGB3A2Q96PL1 93 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR52E6Q96RD3 313 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 C1QTNF6Q9BXI9 259 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 SLC25A19Q9HC21 320 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 DLL4Q9NR61 685 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF319Q9P2F9 582 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 HSPB8Q9UJY1 196 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 TP53TG1Q9Y2A0 90 aa4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 LSM5Q9Y4Y9 91 aaKnown RBP4.27□□□□□ -1.73
TRAPPC11-208ENST00000511955 PIEZO2Q9H5I5 2752 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZFYVE26Q68DK2 2539 aa4.26□□□□□ -1.73
TRAPPC11-208ENST00000511955 ACACAQ13085 2346 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms