RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 RFESDQ8TAC1 157 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 SMIM19Q96E16 107 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 CPNE2Q96FN4 548 aaPredicted RBP12.19□□□□□ -0.46
COL1A1-213ENST00000511732 AKR1E2Q96JD6 320 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 OR4F4Q96R69 305 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 BABAM2Q9NXR7 383 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 PSG11Q9UQ72 335 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 ST3GAL6Q9Y274 331 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 ZNF281Q9Y2X9 895 aa12.19□□□□□ -0.46
COL1A1-213ENST00000511732 A0A1W2PP11 408 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 MAGEA13PA6NCF6 341 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 OOSP1A8MZH6 123 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 H3BUI4 141 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 GEMIN2O14893 280 aaKnown RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 IGFBP3P17936 291 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 C21orf33P30042 268 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 ZNF93P35789 620 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 ARHGDIBP52566 201 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 LRRC36Q1X8D7 754 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 DDI2Q5TDH0 399 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 CENPVQ7Z7K6 275 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 OSR2Q8N2R0 312 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 ZNF485Q8NCK3 441 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 CAPSLQ8WWF8 208 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 DPCDQ9BVM2 203 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 TMEM138Q9NPI0 162 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 IL36GQ9NZH8 169 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 ING4Q9UNL4 249 aa12.18□□□□□ -0.46
COL1A1-213ENST00000511732 DIMT1Q9UNQ2 313 aaKnown RBP12.18□□□□□ -0.46
COL1A1-213ENST00000511732 TRBV5-5A0A0J9YX44 114 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 A0A1W2PPE3 182 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 XPNPEP2O43895 674 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 SNRNP70P08621 437 aaKnown RBP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 SERPINA2P20848 420 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 BDKRB2P30411 391 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 MNDAP41218 407 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 KCNJ3P48549 501 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 GNG10P50151 68 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 RBM11P57052 281 aaKnown RBP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 RPS11P62280 158 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 ADARB1P78563 741 aaKnown RBP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 NHLRC3Q5JS37 347 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 DMKNQ6E0U4 476 aaPredicted RBP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 CCDC144NLQ6NUI1 221 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 Q6ZPA2 131 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 ZFP41Q8N8Y5 198 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 OR52N1Q8NH53 320 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 OR56B4Q8NH76 319 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 GHSRQ92847 366 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 TOMM40LQ969M1 308 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 RPEQ96AT9 228 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 PGLYRP3Q96LB9 341 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
COL1A1-213ENST00000511732 EXOSC1Q9Y3B2 195 aaKnown RBP12.17□□□□□ -0.46
COL1A1-213ENST00000511732 TRAV8-7A0A075B6U6 113 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 OR7C1O76099 320 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-213ENST00000511732 PPP3R1P63098 170 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 DOC2BQ14184 412 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 LAIR2Q6ISS4 152 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-213ENST00000511732 THNSL2Q86YJ6 484 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 DRAM1Q8N682 238 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 WFDC9Q8NEX5 89 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 CYGBQ8WWM9 190 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 GGHQ92820 318 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 MYDGFQ969H8 173 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 PHF21AQ96BD5 680 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
COL1A1-213ENST00000511732 ZNF184Q99676 751 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-213ENST00000511732 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-213ENST00000511732 DNAH3Q8TD57 4116 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 A0A1W2PPK0 400 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 TCRBV4S1A1TA0A5B7 111 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 IRGMA1A4Y4 181 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 C15orf65H3BRN8 121 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 GPX5O75715 221 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 CSTBP04080 98 aaKnown RBP12.15□□□□□ -0.46
COL1A1-213ENST00000511732 FAM106CPP0CH98 169 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 MYL12AP19105 171 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 RIPK1Q13546 671 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 TTC23Q5W5X9 447 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 OR10A7Q8NGE5 316 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 UBALD1Q8TB05 177 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 MOB4Q9Y3A3 225 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 TSSC4Q9Y5U2 329 aaPredicted RBP12.15□□□□□ -0.46
COL1A1-213ENST00000511732 HSPE1-MOB4S4R3N1 261 aa12.15□□□□□ -0.46
COL1A1-213ENST00000511732 IGLL1P15814 213 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 MADCAM1Q13477 382 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 Q499Y3 187 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 SLC22A6Q4U2R8 563 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 YIF1BQ5BJH7 314 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 ATAD3CQ5T2N8 411 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 CYYR1Q96J86 154 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 PCDHB16Q9NRJ7 776 aa12.14□□□□□ -0.47
COL1A1-213ENST00000511732 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms