RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SLX4Q8IY92 1834 aa3.81□□□□□ -1.8
NIPBL-206ENST00000509429 LOXHD1Q8IVV2 1947 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TRAV36DV7A0A075B6V5 113 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 LOC100130705A0A1B0GUX0 176 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 IQCMA0A1B0GVH7 501 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 WDR27A2RRH5 827 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 G3V2L1 256 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 FABP7O15540 132 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ATP5LO75964 103 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 APOA2P02652 100 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 PFN1P07737 140 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 SP1P08047 785 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR5AC1P0C628 307 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 IGFBP3P17936 291 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 RPL35AP18077 110 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 CSRP1P21291 193 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 MPGP29372 298 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 AGTR1P30556 359 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TGFBR1P36897 503 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 GPR6P46095 362 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 AKR1C2P52895 323 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 NANOS2P60321 138 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 NCS1P62166 190 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 SRYQ05066 204 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 SPHARQ15513 63 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 SSX1Q16384 188 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ACOT6Q3I5F7 207 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 SLC25A35Q3KQZ1 300 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TP53I3Q53FA7 332 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ARL9Q6T311 187 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 PQLC2Q6ZP29 291 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR4N5Q8IXE1 308 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 FER1L6-AS1Q8NA97 138 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ADAD2Q8NCV1 583 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR4K5Q8NGD3 323 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR13A1Q8NGR1 328 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR2T4Q8NH00 348 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ZNF431Q8TF32 576 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TMED6Q8WW62 240 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 OR5P3Q8WZ94 311 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM101Q96IK0 257 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 NRTNQ99748 197 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 GABRG3Q99928 467 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 AGPAT1Q99943 283 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 MIEN1Q9BRT3 115 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TMEM121Q9BTD3 319 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 PBDC1Q9BVG4 233 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 VN1R3Q9BXE9 311 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 CWH43Q9H720 699 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 ACOT13Q9NPJ3 140 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 UQCC1Q9NVA1 299 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 THYN1Q9P016 225 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 NUFIP1Q9UHK0 495 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 PRNDQ9UKY0 176 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 MCTS1Q9ULC4 181 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 FZR1Q9UM11 496 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 BOKQ9UMX3 212 aaPredicted RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 CARHSP1Q9Y2V2 147 aaKnown RBP3.8□□□□□ -1.8
NIPBL-206ENST00000509429 TMED3Q9Y3Q3 217 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 LOXL2Q9Y4K0 774 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 NRAPQ86VF7 1730 aa3.8□□□□□ -1.8
NIPBL-206ENST00000509429 CDK5RAP2Q96SN8 1893 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RBBP6Q7Z6E9 1792 aaKnown RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 PLIN4Q96Q06 1357 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 QSER1Q2KHR3 1735 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 TSPAN11A1L157 253 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 MSGN1A6NI15 193 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 FABP5P3A8MUU1 101 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 H3BMH7 237 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 M0R2Z0 102 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CRXO43186 299 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 OR2T1O43869 369 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CRLF1O75462 422 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GRAP2O75791 330 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 KBTBD11O94819 623 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 AGFG2O95081 481 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 GASTP01350 101 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CT45A6P0DMU7 189 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CT45A5P0DMU8 189 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CT45A7P0DMV0 189 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 ORM2P19652 201 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 PRTN3P24158 256 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CDK2P24941 298 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 MIPP30301 263 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 SOX3P41225 446 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 APOBEC1P41238 236 aaKnown RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 FOLR3P41439 243 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 VAMP7P51809 220 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 HCCSP53701 268 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RAB38P57729 211 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 BTG2P78543 158 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RPL24P83731 157 aaKnown RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 HOXC5Q00444 222 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 RAB40BQ12829 278 aa3.79□□□□□ -1.8
NIPBL-206ENST00000509429 ATXN7L3Q14CW9 347 aaPredicted RBP3.79□□□□□ -1.8
NIPBL-206ENST00000509429 CT45A1Q5HYN5 189 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms