RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 A0A1W2PRG6 482 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 OR5H14A6NHG9 310 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 ABCB11O95342 1321 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 HIVEP2P31629 2446 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 C1QTNF8P60827 252 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 XRCC4Q13426 336 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 RAB31Q13636 194 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 BCL2A1Q16548 175 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 SDK2Q58EX2 2172 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 MIA3Q5JRA6 1907 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 FAM162BQ5T6X4 162 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 HES3Q5TGS1 186 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 SMARCD3Q6STE5 483 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 SPATA31E1Q6ZUB1 1445 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 MRPL52Q86TS9 123 aaKnown RBP1.53□□□□□ -2.16
LSM6-205ENST00000507449 LRRC6Q86X45 466 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 SELENOHQ8IZQ5 122 aaKnown RBP1.53□□□□□ -2.16
LSM6-205ENST00000507449 ACBD4Q8NC06 268 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 OR4A5Q8NH83 315 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 IFT81Q8WYA0 676 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 OR5P3Q8WZ94 311 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 RORBQ92753 470 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 MRAP2Q96G30 205 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 ACBD6Q9BR61 282 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 FAAP24Q9BTP7 215 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 EBPLQ9BY08 206 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 ALX4Q9H161 411 aaPredicted RBP1.53□□□□□ -2.16
LSM6-205ENST00000507449 OR51E2Q9H255 320 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 TREM1Q9NP99 234 aa1.53□□□□□ -2.16
LSM6-205ENST00000507449 DYSFO75923 2080 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 TRAV8-2A0A0B4J237 113 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 A0A1W2PNM2 257 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 SDHAF1A6NFY7 115 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 CRXO43186 299 aaPredicted RBP1.52□□□□□ -2.17
LSM6-205ENST00000507449 FGF16O43320 207 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 SOX14O95416 240 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 SYT1P21579 422 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 PYCR1P32322 319 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 COILP38432 576 aaPredicted RBP1.52□□□□□ -2.17
LSM6-205ENST00000507449 FLOT2Q14254 428 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 MMDQ15546 238 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 OR4D1Q15615 310 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 ZCWPW2Q504Y3 356 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 OLIG3Q7RTU3 272 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 HS3ST5Q8IZT8 346 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 KRTCAP2Q8N6L1 136 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 ZNF738Q8NE65 137 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 CMTM2Q8TAZ6 248 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 CASTOR1Q8WTX7 329 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 KCTD4Q8WVF5 259 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 CLDN23Q96B33 292 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 CMBLQ96DG6 245 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 NRBP2Q9NSY0 501 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 LINC00588Q9Y4M8 146 aa1.52□□□□□ -2.17
LSM6-205ENST00000507449 ARAP3Q8WWN8 1544 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 MYO15BQ96JP2 1530 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 PRR14LQ5THK1 2151 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 BRD4O60885 1362 aaPredicted RBP1.51□□□□□ -2.17
LSM6-205ENST00000507449 GOLGA8IPA6NC78 632 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 C3orf84H3BNL1 204 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 J3QLI3 93 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 LECT2O14960 151 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 SYNGR2O43760 224 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 TNFAIP8O95379 198 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 GPR75O95800 540 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 OPN1SWP03999 348 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 ZNF22P17026 224 aaPredicted RBP1.51□□□□□ -2.17
LSM6-205ENST00000507449 PSMB9P28065 219 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 CRABP2P29373 138 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 MP68P56378 58 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 RAB2AP61019 212 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 SSX7Q7RTT5 188 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 SCXQ7RTU7 201 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 LYZL2Q7Z4W2 148 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 LRP11Q86VZ4 500 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 MUC15Q8N387 334 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 OR11G2Q8NGC1 345 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 RAD51AP1Q96B01 352 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 DDIT4LQ96D03 193 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 FAM210AQ96ND0 272 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 HBEGFQ99075 208 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 CYTH2Q99418 400 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 MS4A12Q9NXJ0 267 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 SLC23A2Q9UGH3 650 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 RPUSD1Q9UJJ7 312 aaKnown RBP1.51□□□□□ -2.17
LSM6-205ENST00000507449 PHLDA3Q9Y5J5 127 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 OR51B4Q9Y5P0 310 aa1.51□□□□□ -2.17
LSM6-205ENST00000507449 RAB3GAP2Q9H2M9 1393 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 TRBV24-1A0A075B6N3 115 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 IGKV1-12A0A0C4DH73 117 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 E7EQL1 145 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 SULT1C2O00338 296 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 GPR171O14626 319 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 SH2D1AO60880 128 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 NDUFS6O75380 124 aaKnown RBP1.5□□□□□ -2.17
LSM6-205ENST00000507449 NPPAP01160 153 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 LTAP01374 205 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 IGKV1D-12P01611 117 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 LIMS3P0CW19 117 aa1.5□□□□□ -2.17
LSM6-205ENST00000507449 LIMS4P0CW20 117 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms