RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 APOA1P02647 267 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF182P17025 639 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-205ENST00000506880 SRD5A1P18405 259 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 DTYMKP23919 212 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 MNDAP41218 407 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 CBX5P45973 191 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 SERPINB10P48595 397 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 MRPS15P82914 257 aaKnown RBP6.97□□□□□ -1.29
PDGFC-205ENST00000506880 HTD2P86397 168 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 UNC119Q13432 240 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 TAF9Q16594 264 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 PIGYQ3MUY2 71 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 FAM120AOSQ5T036 256 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 RSBN1Q5VWQ0 802 aaPredicted RBP6.97□□□□□ -1.29
PDGFC-205ENST00000506880 TMEM200BQ69YZ2 307 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 BAIAP2L2Q6UXY1 529 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 LINC00299Q6ZSB3 139 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 OR11H6Q8NGC7 330 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 OR51D1Q8NGF3 324 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 OR5T2Q8NGG2 359 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 ZNF596Q8TC21 504 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 H1FXQ92522 213 aaKnown RBP6.97□□□□□ -1.29
PDGFC-205ENST00000506880 SUCNR1Q9BXA5 334 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 C12orf4Q9NQ89 552 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 KCNIP1Q9NZI2 227 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 ADAM30Q9UKF2 790 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 PEX16Q9Y5Y5 336 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 JMJD1CQ15652 2540 aa6.97□□□□□ -1.29
PDGFC-205ENST00000506880 A0A075B6Q4 140 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 TMEM272A0A1B0GTI8 110 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SHISA3A0PJX4 238 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 FOXI3A8MTJ6 420 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 CLDN34H7C241 214 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 RAB27BO00194 218 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SPINT2O43291 252 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 NAPSAO96009 420 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 MELTFP08582 738 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 CTXN2P0C2S0 81 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 CGB3P0DN86 165 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 CGB7P0DN87 165 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 BLVRBP30043 206 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SRP14P37108 136 aaKnown RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 KIR2DS4P43632 304 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 DLX6P56179 175 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 EDDM3BP56851 147 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SEC61A1P61619 476 aaKnown RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 MRPS10P82664 201 aaKnown RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 KIR2DS1Q14954 304 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 KRTAP21-3Q3LHN1 58 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 DMRTC1Q5HYR2 192 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 UBE2NLQ5JXB2 153 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 ATAD3CQ5T2N8 411 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 FAHD2BQ6P2I3 314 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF880Q6PDB4 577 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 Q6ZTK2 550 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 BEND2Q8NDZ0 799 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 TMEM104Q8NE00 496 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 OR4S1Q8NGB4 309 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 OR10R2Q8NGX6 335 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 ORAI1Q96D31 301 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 RAB3CQ96E17 227 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 S100A16Q96FQ6 103 aaKnown RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 FAHD2AQ96GK7 314 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 BATF3Q9NR55 127 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 RHBDL2Q9NX52 303 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 ETAA1Q9NY74 926 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SLC23A1Q9UHI7 598 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 DAPK2Q9UIK4 370 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SESN1Q9Y6P5 492 aa6.96□□□□□ -1.3
PDGFC-205ENST00000506880 SIRPB1O00241 398 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 F2RL2O00254 374 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 SULT1C2O00338 296 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 TXNL1O43396 289 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 XRCC3O43542 346 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 MT-ND4P03905 459 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 LPLP06858 475 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 IGHV1-8P0DP01 117 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 HIST1H1DP16402 221 aaKnown RBP6.95□□□□□ -1.3
PDGFC-205ENST00000506880 RPS19P39019 145 aaKnown RBP6.95□□□□□ -1.3
PDGFC-205ENST00000506880 CEACAM3P40198 252 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 DYNLT3P51808 116 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 PRRX1P54821 245 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 SSBP1Q04837 148 aaKnown RBP6.95□□□□□ -1.3
PDGFC-205ENST00000506880 SIGIRRQ6IA17 410 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 CCDC144NLQ6NUI1 221 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 FAM71F2Q6NXP2 309 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 LIAT1Q6ZQX7 453 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 NR2C2APQ86WQ0 139 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 FAM185AQ8N0U4 392 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 LINC00311Q8N616 119 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 C19orf18Q8NEA5 215 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 OR10K1Q8NGX5 313 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 NEK7Q8TDX7 302 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 ZNF418Q8TF45 676 aaPredicted RBP6.95□□□□□ -1.3
PDGFC-205ENST00000506880 DEDD2Q8WXF8 326 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 DGCR14Q96DF8 476 aaKnown RBP6.95□□□□□ -1.3
PDGFC-205ENST00000506880 SEH1LQ96EE3 360 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 COQ2Q96H96 371 aa6.95□□□□□ -1.3
PDGFC-205ENST00000506880 TOLLIPQ9H0E2 274 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms