RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 NAA60Q9H7X0 242 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 LTBP2Q14767 1821 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 IGKV1D-13A0A0B4J2D9 117 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 NXPH2O95156 264 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 IFNA5P01569 189 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CD1AP06126 327 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 IGKV1-13P0DP09 117 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 FSTP19883 344 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 MEOX2P50222 304 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 PRDX4Q13162 271 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 ZNF528Q3MIS6 628 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 OR2C3Q8N628 320 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 CHST5Q9GZS9 411 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 MSL2Q9HCI7 577 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 ASH1LQ9NR48 2969 aaKnown RBP8.29□□□□□ -1.08
PHF3-208ENST00000506783 GPR27Q9NS67 375 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 HDGFL3Q9Y3E1 203 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 PTPRQQ9UMZ3 2332 aa8.29□□□□□ -1.08
PHF3-208ENST00000506783 SERPINE3A8MV23 424 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 LDLRAD4O15165 306 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 PSG2P11465 335 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 CHATP28329 748 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 GFI1BQ5VTD9 330 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 CPEB3Q8NE35 698 aaKnown RBP8.28□□□□□ -1.08
PHF3-208ENST00000506783 PCED1AQ9H1Q7 454 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 SLC25A22Q9H936 323 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 UNKLQ9H9P5 680 aaKnown RBP8.28□□□□□ -1.08
PHF3-208ENST00000506783 CACNG5Q9UF02 275 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 EIF1BO60739 113 aaKnown RBP8.28□□□□□ -1.08
PHF3-208ENST00000506783 CBR3O75828 277 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 LIFP15018 202 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 FABP4P15090 132 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 FOXC1Q12948 553 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 BATFQ16520 125 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 ZNF818PQ6ZRF7 136 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 NMES1Q9C002 83 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 ZNF665Q9H7R5 613 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 OR1A1Q9P1Q5 309 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 E5RGE8 158 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 SLC25A4P12235 298 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 FUT3P21217 361 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 COL8A2P25067 703 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 EWSR1Q01844 656 aaKnown RBP eCLIP8.28□□□□□ -1.08
PHF3-208ENST00000506783 FDX2Q6P4F2 183 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 TMEM37Q8WXS4 190 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 DEPPQ9NTK1 212 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 PLA2G2EQ9NZK7 142 aa8.28□□□□□ -1.08
PHF3-208ENST00000506783 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 DSCR4P56555 118 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 EDDM3BP56851 147 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 RSPO1Q2MKA7 263 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 ZDHHC23Q8IYP9 409 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 POC1AQ8NBT0 407 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 OR10J5Q8NHC4 309 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PP6455Q8WZ26 134 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 TVP23CQ96ET8 276 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 SNX22Q96L94 193 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PBDC1Q9BVG4 233 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 IL17BQ9UHF5 180 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 SVEP1Q4LDE5 3571 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 DEGS1O15121 323 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 GPR137BO60478 399 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 CRYAAP02489 173 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 FABP1P07148 127 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 UMODP07911 640 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 QRFPP83859 136 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 C5orf46Q6UWT4 87 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 LEAP2Q969E1 77 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 POM121Q96HA1 1249 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 SIGLEC12Q96PQ1 595 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 BARX1Q9HBU1 254 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 NDRG3Q9UGV2 375 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PRSS50Q9UI38 385 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 TINAGQ9UJW2 476 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 CHD3Q12873 2000 aaKnown RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 A0A1W2PPQ1 181 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 ANKRD30BLA7E2S9 258 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PRSS44E7EML9 344 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 MPPED1O15442 326 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 MT-CO3P00414 261 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 IFNA17P01571 189 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 CD55P08174 381 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 S100GP29377 79 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 IL2RGP31785 369 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 APLNRP35414 380 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 PTGDSP41222 190 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 DVL1P1P54792 670 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 PCOLCEQ15113 449 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 ZNF239Q16600 458 aaKnown RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 WDR5BQ86VZ2 330 aa8.27□□□□□ -1.09
PHF3-208ENST00000506783 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
PHF3-208ENST00000506783 DVL1O14640 695 aa8.26□□□□□ -1.09
PHF3-208ENST00000506783 PHOX2AO14813 284 aa8.26□□□□□ -1.09
PHF3-208ENST00000506783 SRSF10O75494 262 aaKnown RBP8.26□□□□□ -1.09
PHF3-208ENST00000506783 MMP7P09237 267 aaPredicted RBP8.26□□□□□ -1.09
PHF3-208ENST00000506783 FAM157CP0CG43 387 aa8.26□□□□□ -1.09
PHF3-208ENST00000506783 RAB2AP61019 212 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms