RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 TDGF1P3P51864 188 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 ERVFC1-1P60608 527 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 ACSF3Q4G176 576 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 LCN15Q6UWW0 184 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 SSX7Q7RTT5 188 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 OSR2Q8N2R0 312 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 NAT8Q9UHE5 227 aa14.73□□□□□ -0.05
SQSTM1-211ENST00000506690 FER1L5A0AVI2 2057 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 IGHV3-20A0A0C4DH32 117 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 IFNA5P01569 189 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 C1orf189Q5VU69 101 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 TEX38Q6PEX7 206 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 MRGPRGQ86SM5 289 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 THAP3Q8WTV1 239 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 TMEM18Q96B42 140 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 VSIRQ9H7M9 311 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 SLC7A10Q9NS82 523 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 LOC102725191A0A1B0GVB3 256 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 PPP5D1E7EU14 171 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 SLC33A1O00400 549 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 PDCD6O75340 191 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 FGF5P12034 268 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 UCP1P25874 307 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 GUCA1AP43080 201 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 FAM3BP58499 235 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 NCR3LG1Q68D85 454 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 CYP2G1PQ6ZSU1 146 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 NAT6Q93015 286 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 NABP1Q96AH0 204 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 RSG1Q9BU20 258 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 Q9N2K0 584 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 TAAR3PQ9P1P4 343 aa14.72□□□□□ -0.05
SQSTM1-211ENST00000506690 AQP7P3A6NL99 342 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 MARCH11A6NNE9 402 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 TLX3O43711 291 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 NXPH3O95157 252 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 HLA-HP01893 362 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 MSX1P28360 303 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 CCKARP32238 428 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 FGF8P55075 233 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 PMS2P11Q13670 270 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 CNN3Q15417 329 aaKnown RBP14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 ADIRFQ15847 76 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 C10orf128Q5T292 105 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF818PQ6ZRF7 136 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 ZNF295-AS1Q8N0V1 137 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 CBLN4Q9NTU7 201 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 ST3GAL6Q9Y274 331 aa14.71□□□□□ -0.05
SQSTM1-211ENST00000506690 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 CEBPZOSA8MTT3 80 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 B4E171 279 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 GABRG2P18507 467 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 CTHP32929 405 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 TSPAN7P41732 249 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 CLDN17P56750 224 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 ERVS71-1P61550 626 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 FOXL2NBQ6ZUU3 175 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 WDR5BQ86VZ2 330 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 OR1L3Q8NH93 324 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 KLRF1Q9NZS2 232 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 PRSS50Q9UI38 385 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 RNF150Q9ULK6 438 aa14.71□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM210A6NLX4 147 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 ZNF25P17030 456 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 MALLQ13021 153 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 RNPS1Q15287 305 aaKnown RBP14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 SPIN3Q5JUX0 258 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 ACTL10Q5JWF8 245 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 PHYHD1Q5SRE7 291 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 C1orf194Q5T5A4 169 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 SLC25A24Q6NUK1 477 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 LHFPL2Q6ZUX7 228 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 NECAP1Q8NC96 275 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 SMIM7Q9BQ49 75 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 PSMG3Q9BT73 122 aaPredicted RBP14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 RBKSQ9H477 322 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 IL36GQ9NZH8 169 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 SPAG17Q6Q759 2223 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 IGLV3-32A0A0A0MS00 114 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 KIR2DL5BA0A0G2JN68 375 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 KIR2DL5BA0A0G2JPC4 375 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 TCRBV21S2A2A0A5A6 115 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 NR2C1P13056 603 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 GALR1P47211 349 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 FOXL2P58012 376 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 SHBQ15464 509 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 TMEM241Q24JQ0 296 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 KIR2DL5AQ8N109 375 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 GAPTQ8N292 157 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 OR2AE1Q8NHA4 323 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 BORCS8Q96FH0 119 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 GPHA2Q96T91 129 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 MYOTQ9UBF9 498 aa14.7□□□□□ -0.06
SQSTM1-211ENST00000506690 KIAA2026Q5HYC2 2103 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 METTL15P1P0C7V9 234 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 TCN2P20062 427 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 TUBG1P23258 451 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 PTGDSP41222 190 aa14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 MRPS34P82930 218 aaKnown RBP14.69□□□□□ -0.06
SQSTM1-211ENST00000506690 BSXQ3C1V8 233 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms