RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 BTBD17A6NE02 478 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 MSGN1A6NI15 193 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 A6NJ64 397 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 AHRRA9YTQ3 701 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 EIF1BO60739 113 aaKnown RBP4.93□□□□□ -1.62
SCLT1-207ENST00000506233 VAMP5O95183 116 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 P0C879 139 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 SELEP16581 610 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 ECH1Q13011 328 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 DHRS2Q13268 280 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 PPP1R1AQ13522 171 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TSC22D1Q15714 1073 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 GABRA6Q16445 453 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 CDNFQ49AH0 187 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 PABPC1L2AQ5JQF8 200 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 C6orf201Q7Z4U5 140 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 TOMM5Q8N4H5 51 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 OR10C1Q96KK4 312 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 RAB40CQ96S21 281 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 GVINP1Q7Z2Y8 2422 aa4.93□□□□□ -1.62
SCLT1-207ENST00000506233 A0A1W2PR80 420 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MEX3AA1L020 520 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 SNRPGP15A8MWD9 76 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 M0R135 149 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 TNFRSF13BO14836 293 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CST4P01036 141 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 HLA-HP01893 362 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 H2BFMP0C1H6 154 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 OR4E1P0C645 316 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 FAM157CP0CG43 387 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF93P35789 620 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 GRB2P62993 217 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MAB21L1Q13394 359 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 GLT8D1Q68CQ7 371 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 STEAP1BQ6NZ63 245 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 KCTD18Q6PI47 426 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 DRAM2Q6UX65 266 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PGAP1Q75T13 922 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 BPIFCQ8NFQ6 507 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 OR5P3Q8WZ94 311 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CPNE4Q96A23 557 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF799Q96GE5 643 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 OR51I2Q9H344 312 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 EIF3KQ9UBQ5 218 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ATPIF1Q9UII2 106 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 AK3Q9UIJ7 227 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MUC6Q6W4X9 2439 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 LINC00862A6NCI5 91 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 TP53I11O14683 189 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 GEMIN2O14893 280 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ANGPTL7O43827 346 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CA11O75493 328 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MTRF1O75570 445 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 RGS11O94810 467 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 IGKV1-39P01597 117 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 IGKV1D-39P04432 117 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 H2AFB2P0C5Z0 115 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PMELP40967 661 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 OR3A2P47893 321 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CFHR3Q02985 330 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PNRC1Q12796 327 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM244Q5VVB8 128 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF283Q8N7M2 679 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MITD1Q8WV92 249 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MAFIPQ8WZ33 124 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 EMG1Q92979 244 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 C10orf35Q96D05 121 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 REEP6Q96HR9 211 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 GAL3ST1Q99999 423 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PARP12Q9H0J9 701 aaKnown RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 SDHAF3Q9NRP4 125 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 RAB22AQ9UL26 194 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 C9orf170A2RU37 121 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 FAM25AB3EWG3 89 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 FAM25CB3EWG5 89 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 FAM25GB3EWG6 89 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CCL24O00175 119 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PDCD5O14737 125 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 MPV17P39210 176 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 NPBWR1P48145 328 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 CSNK1A1P48729 337 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PRKXP51817 358 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ABHD12BQ7Z5M8 362 aaPredicted RBP4.92□□□□□ -1.62
SCLT1-207ENST00000506233 FCAMRQ8WWV6 532 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 SFXN2Q96NB2 322 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 TMEM246Q9BRR3 403 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 C1QTNF6Q9BXI9 259 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 SHARPINQ9H0F6 387 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 PIGLQ9Y2B2 252 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 ZNF835Q9Y2P0 537 aa4.92□□□□□ -1.62
SCLT1-207ENST00000506233 DNAJC13O75165 2243 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 IGKV1D-13A0A0B4J2D9 117 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 SYT7O43581 403 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 SYNGR1O43759 233 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 IGKV1-13P0DP09 117 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 ICAM2P13598 275 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 CEACAM1P13688 526 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 CDKN1BP46527 198 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 CCL11P51671 97 aa4.91□□□□□ -1.62
SCLT1-207ENST00000506233 DLK1P80370 383 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms