RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TSPOP30536 169 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 NUP62P37198 522 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 CBX5P45973 191 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 APOFQ13790 326 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 MMDQ15546 238 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 TRAM1Q15629 374 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 Q6ZT83 130 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 SLC25A45Q8N413 288 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 KCTD4Q8WVF5 259 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 HIST1H2BAQ96A08 127 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 LRRC19Q9H756 370 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 TUBA4BQ9H853 241 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 TBL2Q9Y4P3 447 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 MYO15BQ96JP2 1530 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 VWDEQ8N2E2 1590 aa1.54□□□□□ -2.16
TOPBP1-204ENST00000505804 ARGFXA6NJG6 315 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 FAM183AA6NL82 134 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 KLRC4-KLRK1H3BQV0 150 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 I3L4J1 428 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 OVOL1O14753 267 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 SOX14O95416 240 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 CCDC172P0C7W6 258 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 SPNP16150 400 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 GTF2H1P32780 548 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 KRTAP12-1P59990 96 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 VSNL1P62760 191 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 TNNC1P63316 161 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 PSG4Q00888 419 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 FOXF1Q12946 379 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 C18orf21Q32NC0 220 aaPredicted RBP1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 LAMTOR1Q6IAA8 161 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 SSX6Q7RTT6 188 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 OLIG3Q7RTU3 272 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 RBM45Q8IUH3 476 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 KRTCAP2Q8N6L1 136 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 OR5C1Q8NGR4 320 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 MFSD8Q8NHS3 518 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 PDCD6IPQ8WUM4 868 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 TAPBPLQ9BX59 468 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 RAB1BQ9H0U4 201 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 FBXL15Q9H469 300 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 IFT46Q9NQC8 304 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 TMEM106BQ9NUM4 274 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 TAS2R13Q9NYV9 303 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 RPUSD1Q9UJJ7 312 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 NXT1Q9UKK6 140 aaKnown RBP1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 ADAMTS7Q9UKP4 1686 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 USH1CQ9Y6N9 552 aa1.53□□□□□ -2.16
TOPBP1-204ENST00000505804 MYO9BQ13459 2157 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 NDUFS8O00217 210 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 CDIPTO14735 213 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 UBDO15205 165 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 CRTAPO75718 401 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 PYCR1P32322 319 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 RPA3P35244 121 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 MAGEA3P43357 314 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 UBE2KP61086 200 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 TSPAN5P62079 268 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 DGAT2L6Q6ZPD8 337 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM183BPQ6ZVS7 135 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 SSX7Q7RTT5 188 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 TCF23Q7RTU1 214 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM19A3Q7Z5A8 133 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 NIT1Q86X76 327 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 CDRT4Q8N9R6 151 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 OR4K13Q8NH42 304 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 LRRC20Q8TCA0 184 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 SPPL2BQ8TCT7 592 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 OR5P2Q8WZ92 322 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 CLDN23Q96B33 292 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 CATSPER2Q96P56 530 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 ALX4Q9H161 411 aaPredicted RBP1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 HSPE1-MOB4S4R3N1 261 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 PLXNA3P51805 1871 aa1.52□□□□□ -2.17
TOPBP1-204ENST00000505804 DNMT1P26358 1616 aaKnown RBP1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 TRAV8-2A0A0B4J237 113 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 TRGV4A0A0C4DH28 118 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 A0A1W2PRG6 482 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 C17orf98A8MV24 154 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 TMEM250H0YL14 139 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 TP53I11O14683 189 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 P0DMU3 169 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM231AP0DMU4 169 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 FAM231CP0DMU5 169 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 PSMB9P28065 219 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 CRABP1P29762 137 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 DEFB103AP81534 67 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 CD164Q04900 197 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 PGLYRP3Q96LB9 341 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 EBPLQ9BY08 206 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 TAS2R9Q9NYW1 312 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 VPREB3Q9UKI3 123 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 MYO5BQ9ULV0 1848 aa1.51□□□□□ -2.17
TOPBP1-204ENST00000505804 OTOFQ9HC10 1997 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 CACNA1GO43497 2377 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 ATAD5Q96QE3 1844 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 STRCP1A6NGW2 1772 aa1.5□□□□□ -2.17
TOPBP1-204ENST00000505804 COL18A1P39060 1754 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms