RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 PCDHB16Q9NRJ7 776 aa9.67□□□□□ -0.86
SNHG4-202ENST00000505522 AMMECR1Q9Y4X0 333 aaPredicted RBP9.67□□□□□ -0.86
SNHG4-202ENST00000505522 A0A1W2PPE3 182 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 FADS2O95864 444 aaKnown RBP9.66□□□□□ -0.86
SNHG4-202ENST00000505522 CCDC159P0C7I6 412 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 TMEM11P17152 192 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 RAB3AP20336 220 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
SNHG4-202ENST00000505522 SSTR5P35346 364 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 SOX2P48431 317 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 GBX2P52951 348 aaPredicted RBP9.66□□□□□ -0.86
SNHG4-202ENST00000505522 PAX5Q02548 391 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 EGFEM1PQ0D2K5 195 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 MADCAM1Q13477 382 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 HES1Q14469 280 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 IL13RA2Q14627 380 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 ASCL4Q6XD76 172 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 MRPL41Q8IXM3 137 aaKnown RBP9.66□□□□□ -0.86
SNHG4-202ENST00000505522 Q8NFD4 153 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 OR52I1Q8NGK6 324 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 MYCBPQ99417 103 aaPredicted RBP9.66□□□□□ -0.86
SNHG4-202ENST00000505522 GPER1Q99527 375 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 BARHL1Q9BZE3 327 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 FAM192AQ9GZU8 254 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 TAS2R4Q9NYW5 299 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 LINC00527Q9UJ94 153 aa9.66□□□□□ -0.86
SNHG4-202ENST00000505522 CDRT1O95170 752 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 HTR3BO95264 441 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 DUS4LO95620 317 aaKnown RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 CLIC3O95833 236 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 RPSAP08865 295 aaKnown RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 RAB7AP51149 207 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 RPL23AP62750 156 aaKnown RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 RAB40BQ12829 278 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 MRPL28Q13084 256 aaKnown RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 RSU1Q15404 277 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 DEFB121Q5J5C9 76 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 VAX1Q5SQQ9 334 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 XAF1Q6GPH4 301 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 C11orf87Q6NUJ2 197 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 OR8H3Q8N146 312 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 SUMF2Q8NBJ7 301 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 HAVCR2Q8TDQ0 301 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 CPNE2Q96FN4 548 aaPredicted RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 Q96MT0 163 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 SLC29A1Q99808 456 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 JAM3Q9BX67 310 aa9.65□□□□□ -0.86
SNHG4-202ENST00000505522 MRPS18AQ9NVS2 196 aaKnown RBP9.65□□□□□ -0.86
SNHG4-202ENST00000505522 LOC100130705A0A1B0GUX0 176 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 LINC01548A6NM66 108 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 MAGEB3O15480 346 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 FGF16O43320 207 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 MPZL2O60487 215 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 LIMS3P0CW19 117 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 LIMS4P0CW20 117 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 KCNJ3P48549 501 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 THBS3P49746 956 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 ZFP1Q6P2D0 407 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 OR2W3Q7Z3T1 314 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 OR10A7Q8NGE5 316 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 OR51D1Q8NGF3 324 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 OR10X1Q8NGY0 326 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 CHPT1Q8WUD6 406 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 APH1BQ8WW43 257 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 DPCDQ9BVM2 203 aaPredicted RBP9.64□□□□□ -0.87
SNHG4-202ENST00000505522 ST3GAL6Q9Y274 331 aa9.64□□□□□ -0.87
SNHG4-202ENST00000505522 IGHV3-72A0A0B4J1Y9 119 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 SERPINE3A8MV23 424 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 HSD17B6O14756 317 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 IGHG2P01859 326 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 REG1BP48304 166 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 RBM11P57052 281 aaKnown RBP9.63□□□□□ -0.87
SNHG4-202ENST00000505522 ZNF816Q0VGE8 651 aaPredicted RBP9.63□□□□□ -0.87
SNHG4-202ENST00000505522 FAM53AQ6NSI3 398 aaPredicted RBP9.63□□□□□ -0.87
SNHG4-202ENST00000505522 SLC35E3Q7Z769 313 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 MOB3BQ86TA1 216 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 UBALD1Q8TB05 177 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 TMEM106AQ96A25 262 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 ORAI1Q96D31 301 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 IFT22Q9H7X7 185 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 FAM118AQ9NWS6 357 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 ING4Q9UNL4 249 aa9.63□□□□□ -0.87
SNHG4-202ENST00000505522 RPL36Q9Y3U8 105 aaKnown RBP9.63□□□□□ -0.87
SNHG4-202ENST00000505522 DNAH9Q9NYC9 4486 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 IGHV1-3A0A0C4DH29 117 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 NUDT19A8MXV4 375 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 C15orf65H3BRN8 121 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 GEMIN2O14893 280 aaKnown RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 OR7C1O76099 320 aaPredicted RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 ETV1P50549 477 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 EBI3Q14213 229 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 SMN1Q16637 294 aaKnown RBP9.62□□□□□ -0.87
SNHG4-202ENST00000505522 KLHL22Q53GT1 634 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 NHLRC3Q5JS37 347 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 DDI2Q5TDH0 399 aa9.62□□□□□ -0.87
SNHG4-202ENST00000505522 RPL22L1Q6P5R6 122 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms