RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 UTF1Q5T230 341 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 OR51T1Q8NGJ9 327 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 OR52I1Q8NGK6 324 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 OR13A1Q8NGR1 328 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 OR56B4Q8NH76 319 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 MRGPRDQ8TDS7 321 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 MCRIP2Q9BUT9 160 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 TAS2R4Q9NYW5 299 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 IDI2-AS1Q9NZ38 188 aa12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 RPL36Q9Y3U8 105 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-213ENST00000505074 A0A087X0M5 115 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 A0A1B0GX30 115 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 IL1AP01583 271 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 CD2P06729 351 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 SNRNP70P08621 437 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 GTF2A1P52655 376 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 DGCR2P98153 550 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 C10orf99Q6UWK7 81 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 C10orf67Q8IYJ2 551 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 PXT1Q8NFP0 134 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 OR10X1Q8NGY0 326 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 RFESDQ8TAC1 157 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 S100A13Q99584 98 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 ING4Q9UNL4 249 aa12.71□□□□□ -0.37
PDLIM7-213ENST00000505074 TRAV24A0A0B4J272 114 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 PSMB11A5LHX3 300 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 J3QR06 171 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 CSTBP04080 98 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 TMEM11P17152 192 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 PPP3R1P63098 170 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 MADCAM1Q13477 382 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 HNF4GQ14541 408 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 IL13RA2Q14627 380 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 RHOXF1Q8NHV9 184 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF649Q9BS31 505 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 FAM118AQ9NWS6 357 aa12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 GAR1Q9NY12 217 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-213ENST00000505074 TRAV39A0A0B4J263 110 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 OR7C1O76099 320 aaPredicted RBP12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 CDRT1O95170 752 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 AMY1AP04745 511 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 AMY2AP04746 511 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 SSTR5P35346 364 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 DDI2Q5TDH0 399 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 ELP2Q6IA86 826 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 MRPL41Q8IXM3 137 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 OSR2Q8N2R0 312 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 DRAM1Q8N682 238 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 Q8NFD4 153 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 OR51D1Q8NGF3 324 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 PLPPR1Q8TBJ4 325 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 SLC29A1Q99808 456 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 ASCL2Q99929 193 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 METTL9Q9H1A3 318 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 PSG11Q9UQ72 335 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
PDLIM7-213ENST00000505074 STAB2Q8WWQ8 2551 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 SACSQ9NZJ4 4579 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 A0A1W2PPE3 182 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 H0YHG0 523 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 RAMP3O60896 148 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 SERPINA2P20848 420 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 KCNJ3P48549 501 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 RAB7AP51149 207 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 ATAD3CQ5T2N8 411 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 RSBN1Q5VWQ0 802 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 TMPRSS11AQ6ZMR5 421 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF329Q86UD4 541 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 SUMF2Q8NBJ7 301 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 RGP1Q92546 391 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 TFAP2CQ92754 450 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 TMEM106AQ96A25 262 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 DPCDQ9BVM2 203 aaPredicted RBP12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 PALMDQ9NP74 551 aa12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 LSM4Q9Y4Z0 139 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-213ENST00000505074 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 SERPINE3A8MV23 424 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 NUDT19A8MXV4 375 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 BAG2O95816 211 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 LIMS3P0CW19 117 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 LIMS4P0CW20 117 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 CGB3P0DN86 165 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 CGB7P0DN87 165 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 LYL1P12980 280 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 ZNF93P35789 620 aaPredicted RBP12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 DIAPH2-AS1Q14236 149 aa12.67□□□□□ -0.38
PDLIM7-213ENST00000505074 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms