RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ANKRD34BA5PLL1 514 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 MSGN1A6NI15 193 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 NPPAP01160 153 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 CSN2P05814 226 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 NCK1P16333 377 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 ZNF3P17036 446 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 ATF4P18848 351 aaPredicted RBP9.39□□□□□ -0.91
LSM6-204ENST00000504181 IFNGR2P38484 337 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 NDPQ00604 133 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 UBE2V2Q15819 145 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 LRRC36Q1X8D7 754 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 Q8N1X5 172 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 TTTY10Q9BZA0 68 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 RANGRFQ9HD47 186 aaPredicted RBP9.39□□□□□ -0.91
LSM6-204ENST00000504181 IL20Q9NYY1 176 aa9.39□□□□□ -0.91
LSM6-204ENST00000504181 NUFIP1Q9UHK0 495 aaKnown RBP9.39□□□□□ -0.91
LSM6-204ENST00000504181 RIIAD1A6NNX1 92 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 IFNGP01579 166 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 SSTR5P35346 364 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 FUT6P51993 359 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 HCCSP53701 268 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 SMIM11AP58511 58 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 DYRK1AQ13627 763 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 APOFQ13790 326 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 TRIM25Q14258 630 aaKnown RBP9.38□□□□□ -0.91
LSM6-204ENST00000504181 SAMD4BQ5PRF9 694 aaKnown RBP9.38□□□□□ -0.91
LSM6-204ENST00000504181 LAX1Q8IWV1 398 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 GVQW1Q8N7I0 195 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 ZNF565Q8N9K5 539 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 MRGPRDQ8TDS7 321 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 BORCS8Q96FH0 119 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 ANKRD60Q9BZ19 345 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 HMG20AQ9NP66 347 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 CMTM6Q9NX76 183 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 KIF25Q9UIL4 384 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
LSM6-204ENST00000504181 MEIKINA0A087WXM9 373 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
LSM6-204ENST00000504181 A0A1B0GTI1 187 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 SLC33A1O00400 549 aaPredicted RBP9.37□□□□□ -0.91
LSM6-204ENST00000504181 HSPB6O14558 160 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 SPRY2O43597 315 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 CYB5AP00167 134 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 C21orf33P30042 268 aaPredicted RBP9.37□□□□□ -0.91
LSM6-204ENST00000504181 BMI1P35226 326 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 LIPEQ05469 1076 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 DEFB135Q30KP9 77 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
LSM6-204ENST00000504181 C4orf48Q5BLP8 95 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 SLC16A12Q6ZSM3 486 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 RDH10Q8IZV5 341 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 TMEM217Q8N7C4 229 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 OR2K2Q8NGT1 345 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 ANP32BQ92688 251 aaKnown RBP9.37□□□□□ -0.91
LSM6-204ENST00000504181 SCRT2Q9NQ03 307 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 ARMC1Q9NVT9 282 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 FBXL17Q9UF56 701 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 ERGIC3Q9Y282 383 aa9.37□□□□□ -0.91
LSM6-204ENST00000504181 NPIPB11E5RHQ5 1161 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 SOX14O95416 240 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 ALOX5APP20292 161 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 IL3RAP26951 378 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
LSM6-204ENST00000504181 GUCA2BQ16661 112 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 ZNF829Q3KNS6 432 aaPredicted RBP9.36□□□□□ -0.91
LSM6-204ENST00000504181 COQ5Q5HYK3 327 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 PYHIN1Q6K0P9 492 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 OR2T33Q8NG76 320 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 OR9Q2Q8NGE9 314 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 C2CD4CQ8TF44 421 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 ABHD5Q8WTS1 349 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 RITA1Q96K30 269 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 MROQ9BYG7 248 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 COMMD4Q9H0A8 199 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 CST11Q9H112 138 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 LINC00574Q9H8X3 128 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 INTS9Q9NV88 658 aaKnown RBP9.36□□□□□ -0.91
LSM6-204ENST00000504181 GID8Q9NWU2 228 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 BAIAP2Q9UQB8 552 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 V9GYQ6 96 aa9.36□□□□□ -0.91
LSM6-204ENST00000504181 AGRNO00468 2067 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 TRAV39A0A0B4J263 110 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 PRR32B1ATL7 298 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 M0R2N4 97 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 TRGV3P03979 118 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 RRM2P31350 389 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 NANOS2P60321 138 aaKnown RBP9.35□□□□□ -0.91
LSM6-204ENST00000504181 ACTBP60709 375 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 SF3A3Q12874 501 aaKnown RBP eCLIP9.35□□□□□ -0.91
LSM6-204ENST00000504181 BCL2L15Q5TBC7 163 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 LIN54Q6MZP7 749 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 Q6P435 159 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 FAHD1Q6P587 224 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 RASSF6Q6ZTQ3 369 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 ZNF645Q8N7E2 425 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 TCTEX1D1Q8N7M0 179 aa9.35□□□□□ -0.91
LSM6-204ENST00000504181 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms