RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 OR52N1Q8NH53 320 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 RFESDQ8TAC1 157 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 RGP1Q92546 391 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 GGHQ92820 318 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 RPEQ96AT9 228 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 R3HDM4Q96D70 268 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 SMIM19Q96E16 107 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 CITED2Q99967 270 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 SLC25A33Q9BSK2 321 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 DPCDQ9BVM2 203 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 MMP28Q9H239 520 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 CALYQ9NYX4 217 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 IDI2-AS1Q9NZ38 188 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 CLEC2DQ9UHP7 191 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 SIRT4Q9Y6E7 314 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 HSPE1-MOB4S4R3N1 261 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 GPX5O75715 221 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 OR2F2O95006 317 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 GTF2F2P13984 249 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 ADARB1P78563 741 aaKnown RBP9.56□□□□□ -0.88
MED28-203ENST00000503945 PAX5Q02548 391 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 RIPK1Q13546 671 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 LTC4SQ16873 150 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 PIGYQ3MUY2 71 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 Q499Y3 187 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 ATAD3CQ5T2N8 411 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 KPRPQ5T749 579 aaPredicted RBP9.56□□□□□ -0.88
MED28-203ENST00000503945 SAMD5Q5TGI4 173 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 DMKNQ6E0U4 476 aaPredicted RBP9.56□□□□□ -0.88
MED28-203ENST00000503945 Q6ZPA2 131 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 LINC00596Q86U02 117 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 OR13A1Q8NGR1 328 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 MRGPRDQ8TDS7 321 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 KIRREL1Q96J84 757 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 PSG11Q9UQ72 335 aa9.56□□□□□ -0.88
MED28-203ENST00000503945 TCRBV4S1A1TA0A5B7 111 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 NPIPB11E5RHQ5 1161 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 GEMIN2O14893 280 aaKnown RBP9.55□□□□□ -0.88
MED28-203ENST00000503945 IL1AP01583 271 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 IGHV3-7P01780 117 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 LPLP06858 475 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 SERPINA2P20848 420 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 CD83Q01151 205 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 MADCAM1Q13477 382 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 SLC22A6Q4U2R8 563 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 NHLRC3Q5JS37 347 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 C9orf152Q5JTZ5 239 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 RSBN1Q5VWQ0 802 aaPredicted RBP9.55□□□□□ -0.88
MED28-203ENST00000503945 STX19Q8N4C7 294 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 OR10X1Q8NGY0 326 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 NEK7Q8TDX7 302 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 WIPF2Q8TF74 440 aaPredicted RBP9.55□□□□□ -0.88
MED28-203ENST00000503945 TOMM40LQ969M1 308 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 ZNF184Q99676 751 aaPredicted RBP9.55□□□□□ -0.88
MED28-203ENST00000503945 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
MED28-203ENST00000503945 TRAV39A0A0B4J263 110 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 TRBV5-5A0A0J9YX44 114 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 A0A1W2PPK0 400 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 TMEM30CPA0ZSE6 113 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 MCRIP1C9JLW8 97 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 IGFBP3P17936 291 aaPredicted RBP9.54□□□□□ -0.88
MED28-203ENST00000503945 RAB7AP51149 207 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 RBM11P57052 281 aaKnown RBP9.54□□□□□ -0.88
MED28-203ENST00000503945 TAS2R43P59537 309 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 HES1Q14469 280 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 MPV17LQ2QL34 196 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 UTF1Q5T230 341 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 CDH26Q8IXH8 852 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 C8orf59Q8N0T1 100 aaPredicted RBP9.54□□□□□ -0.88
MED28-203ENST00000503945 PLPPR1Q8TBJ4 325 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 CCDC107Q8WV48 283 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 LEAP2Q969E1 77 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 ARL11Q969Q4 196 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 ORAI1Q96D31 301 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 MRPS24Q96EL2 167 aaKnown RBP9.54□□□□□ -0.88
MED28-203ENST00000503945 SPACA1Q9HBV2 294 aa9.54□□□□□ -0.88
MED28-203ENST00000503945 CNOT2Q9NZN8 540 aaKnown RBP9.54□□□□□ -0.88
MED28-203ENST00000503945 NOTCH3Q9UM47 2321 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A18PA6NE21 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A16PA6NEW6 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A20PA6NIJ5 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A9PA6NNJ1 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A12PA8MX19 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A5PA8MXJ8 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 ORC5O43913 435 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 LALBAP00709 142 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 MT-ND4P03905 459 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 MAS1P04201 325 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 GAPDHP04406 335 aaKnown RBP9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A15PP0C7V4 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A13PP0C7W8 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A14PP0C7W9 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 FAM90A24PP0C7X0 464 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 CELP19835 753 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 CAPGP40121 348 aa9.53□□□□□ -0.88
MED28-203ENST00000503945 RPS11P62280 158 aaKnown RBP eCLIP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms