RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CNIH3Q8TBE1 160 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 MYOZ3Q8TDC0 251 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 ST6GALNAC6Q969X2 333 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 PELI1Q96FA3 418 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 TBX5Q99593 518 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 ABCG5Q9H222 651 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 RAB9BQ9NP90 201 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 MRPS18AQ9NVS2 196 aaKnown RBP4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 CALYQ9NYX4 217 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 IL36GQ9NZH8 169 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 GNG8Q9UK08 70 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 PSG11Q9UQ72 335 aa4.81□□□□□ -1.64
LSM3P4-201ENST00000502948 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 TRAV24A0A0B4J272 114 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 IGHV1-3A0A0C4DH29 117 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 DAPL1A0PJW8 107 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 MEX3AA1L020 520 aaKnown RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 SERPINE3A8MV23 424 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 H0YJX3 145 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 M0R129 80 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 CCL24O00175 119 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 RRP9O43818 475 aaKnown RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF780AO75290 641 aaPredicted RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 CA11O75493 328 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ATP5HO75947 161 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 IGHG4P01861 327 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ALPLP05186 524 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 CCDC159P0C7I6 412 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 GPR12P47775 334 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 RUNX1Q01196 453 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 CFHR3Q02985 330 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 BNIP1Q12981 228 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 GALEQ14376 348 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 MPV17LQ2QL34 196 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 CCDC58Q4VC31 144 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 LY6G6FQ5SQ64 297 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF691Q5VV52 312 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 C8orf86Q6ZUL3 223 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF554Q86TJ5 538 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF329Q86UD4 541 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 GAPTQ8N292 157 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 FAM71E2Q8N5Q1 922 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 TMEM104Q8NE00 496 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR51A4Q8NGJ6 313 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR5M8Q8NGP6 311 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR13A1Q8NGR1 328 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR13C3Q8NGS6 347 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR13C9Q8NGT0 318 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR2T10Q8NGZ9 312 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 OR56B4Q8NH76 319 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 EAF1Q96JC9 268 aaPredicted RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF649Q9BS31 505 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 PPIL3Q9H2H8 161 aaKnown RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 DCLRE1BQ9H816 532 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 PAK1IP1Q9NWT1 392 aaPredicted RBP4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 KIF25Q9UIL4 384 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 U3KQK5 164 aa4.8□□□□□ -1.64
LSM3P4-201ENST00000502948 MEIKINA0A087WXM9 373 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 C15orf65H3BRN8 121 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 HSD17B6O14756 317 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 MAGEB3O15480 346 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 GPX5O75715 221 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 FADS2O95864 444 aaKnown RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 IGKV1D-33P01593 117 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 IGKV1-33P01594 117 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 GLAP06280 429 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 HCKP08631 526 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 GABRB1P18505 474 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 RAB3AP20336 220 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 NFYBP25208 207 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 IL3RAP26951 378 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 PSMB8P28062 276 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 HOXD3P31249 432 aaPredicted RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 POLR2IP36954 125 aaKnown RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 RAB40BQ12829 278 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 GPR50Q13585 617 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 ATXN7L3Q14CW9 347 aaPredicted RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 PAN3Q58A45 887 aaKnown RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 CXorf66Q5JRM2 361 aaPredicted RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 KHDC1LQ5JSQ8 128 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 C9orf152Q5JTZ5 239 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 TRAT1Q6PIZ9 186 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 CDH26Q8IXH8 852 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 Q8N9W7 124 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 OR10X1Q8NGY0 326 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 OR10AC1Q8NH08 325 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 OR5AK2Q8NH90 309 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 BCAS4Q8TDM0 211 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 C4orf3Q8WVX3 66 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 MRPS24Q96EL2 167 aaKnown RBP4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 RNFT2Q96EX2 444 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 RAX2Q96IS3 184 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 C4orf36Q96KX1 117 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 Q96MT0 163 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 SPACA1Q9HBV2 294 aa4.79□□□□□ -1.64
LSM3P4-201ENST00000502948 PLSCR3Q9NRY6 295 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms