RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 OR2M2Q96R28 347 aa5.84□□□□□ -1.47
SNX13-212ENST00000498463 NKX6-2Q9C056 277 aaPredicted RBP5.84□□□□□ -1.47
SNX13-212ENST00000498463 ASB7Q9H672 318 aa5.84□□□□□ -1.47
SNX13-212ENST00000498463 CACYBPQ9HB71 228 aaKnown RBP5.84□□□□□ -1.47
SNX13-212ENST00000498463 RBAKQ9NYW8 714 aaPredicted RBP5.84□□□□□ -1.47
SNX13-212ENST00000498463 ADAMTS12P58397 1594 aa5.84□□□□□ -1.48
SNX13-212ENST00000498463 PCM1Q15154 2024 aa5.84□□□□□ -1.48
SNX13-212ENST00000498463 MYH3P11055 1940 aa5.84□□□□□ -1.48
SNX13-212ENST00000498463 MYO5BQ9ULV0 1848 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 PARP4Q9UKK3 1724 aaKnown RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 MARF1Q9Y4F3 1742 aaKnown RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 KIF1AQ12756 1690 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 A0A0J9YXV3 536 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 A0A1B0GTI1 187 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 PLAC8L1A1L4L8 177 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 MYL12BO14950 172 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 TRAF3IP2O43734 574 aaPredicted RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 INSP01308 110 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 IGLV2-23P01705 113 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 CD8AP01732 235 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 MYL12AP19105 171 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 DTYMKP23919 212 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 CD70P32970 193 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 CTRLP40313 264 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 EMP2P54851 167 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 EIF5AP63241 154 aaKnown RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 TSPAN31Q12999 210 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 Q5BKY6 102 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 Q6ZT83 130 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 GTSCR1Q86UQ5 136 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 GPD1LQ8N335 351 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 COA1Q9GZY4 146 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 PARP12Q9H0J9 701 aaKnown RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 LINC00597Q9H2U6 94 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 WDR55Q9H6Y2 383 aaPredicted RBP5.83□□□□□ -1.48
SNX13-212ENST00000498463 MMP26Q9NRE1 261 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 FBXL12Q9NXK8 326 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 CALML5Q9NZT1 146 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 TFR2Q9UP52 801 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 TPRKBQ9Y3C4 175 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 FRMPD1Q5SYB0 1578 aa5.83□□□□□ -1.48
SNX13-212ENST00000498463 ATRNO75882 1429 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 TRAPPC13A5PLN9 417 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 GATBO75879 557 aaKnown RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 PTHP01270 115 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 IFNA17P01571 189 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 IFNA6P05013 189 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 GUSBP08236 651 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 RCC1P18754 421 aaPredicted RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 S100A2P29034 98 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 PMELP40967 661 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 AQP5P55064 265 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 OR12D2P58182 307 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 TAS2R46P59540 309 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 CXCR4P61073 352 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 UBE2NP61088 152 aaKnown RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 HERVK_113P61574 105 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 LYZP61626 148 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 RRAS2P62070 204 aaPredicted RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 HMGCS1Q01581 520 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 EIF4EBP2Q13542 120 aaPredicted RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 LRRC26Q2I0M4 334 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 DEFB115Q30KQ5 88 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 MED27Q6P2C8 311 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 C9orf62Q8N4C0 152 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 ACBD4Q8NC06 268 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 ZNF555Q8NEP9 628 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 OR4M1Q8NGD0 313 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 AP3S1Q92572 193 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 C14orf144Q96I85 54 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 OR52B2Q96RD2 323 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 HBEGFQ99075 208 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 GINS4Q9BRT9 223 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 LXNQ9BS40 222 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 TOLLIPQ9H0E2 274 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 ZNF442Q9H7R0 627 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 NLE1Q9NVX2 485 aaPredicted RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 DDIT4Q9NX09 232 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 SCN3BQ9NY72 215 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 VAX2Q9UIW0 290 aa5.82□□□□□ -1.48
SNX13-212ENST00000498463 CLTCQ00610 1675 aaKnown RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 RAI1Q7Z5J4 1906 aaPredicted RBP5.82□□□□□ -1.48
SNX13-212ENST00000498463 ZCCHC11Q5TAX3 1644 aaKnown RBP5.81□□□□□ -1.48
SNX13-212ENST00000498463 NWD1Q149M9 1564 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 ARHGAP5Q13017 1502 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 TRAV8-4A0A0B4J246 113 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 TCRBV3S1A0A5B6 114 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 SLC5A10A0PJK1 596 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 PRAMEF26H0Y7S4 382 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 H0Y9J4 135 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 KLRC4-KLRK1H3BQV0 150 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 PDCD5O14737 125 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 GADD45GO95257 159 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 P01737 135 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 SLC35G6P0C7Q6 338 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 RPS3P23396 243 aaKnown RBP eCLIP5.81□□□□□ -1.48
SNX13-212ENST00000498463 DDTP30046 118 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 S100A11P31949 105 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 ACOT2P49753 483 aa5.81□□□□□ -1.48
SNX13-212ENST00000498463 COQ5Q5HYK3 327 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms