RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 HES2Q9Y543 173 aa4.52□□□□□ -1.69
BRCA1-224ENST00000497488 ASTN1O14525 1302 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 TGIF2-C20orf24A0A0A6YYL0 155 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 IGKV1-8A0A0C4DH67 115 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 ARGFXA6NJG6 315 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 MFNGO00587 321 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 PSPHP1O15172 72 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SPAG7O75391 227 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 BGLAPP02818 100 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 FABP3P05413 133 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SNHG28P0DPA3 235 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 CYBAP13498 195 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 PSMB2P49721 201 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SULT1A1P50225 295 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SULT1A2P50226 295 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SYNJ2BPP57105 145 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 PFN3P60673 137 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SLC7A9P82251 487 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF45Q02386 682 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 HERPUD1Q15011 391 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 HIST3H3Q16695 136 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 LRRC75BQ2VPJ9 315 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 METTL21CQ5VZV1 264 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 CLEC19AQ6UXS0 136 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 LYG2Q86SG7 212 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 COMMD7Q86VX2 200 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 OR6V1Q8N148 313 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 Q8N377 158 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF485Q8NCK3 441 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 OR4P4Q8NGL7 312 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SLC37A2Q8TED4 501 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 SRSF12Q8WXF0 261 aaKnown RBP4.51□□□□□ -1.69
BRCA1-224ENST00000497488 UCN3Q969E3 161 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 RERGQ96A58 199 aaPredicted RBP4.51□□□□□ -1.69
BRCA1-224ENST00000497488 OR10C1Q96KK4 312 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 NIPSNAP1Q9BPW8 284 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 EMC6Q9BV81 110 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 LRRC61Q9BV99 259 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 OR51E2Q9H255 320 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 FBXL15Q9H469 300 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 DOCK3Q8IZD9 2030 aa4.51□□□□□ -1.69
BRCA1-224ENST00000497488 CLDN24A6NM45 220 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 C2orf74A8MZ97 194 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 I3L4J1 428 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 GALR3O60755 368 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF30P17039 623 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 TAC1P20366 129 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 HTR1EP28566 365 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 UBE2NP61088 152 aaKnown RBP4.5□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF235Q14590 738 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 NSDHLQ15738 373 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 MAPK14Q16539 360 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 TMEM255AQ5JRV8 349 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 DNAJC24Q6P3W2 148 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 DGAT2L6Q6ZPD8 337 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 SMIM15Q7Z3B0 74 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 CLDN22Q8N7P3 220 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 OR10X1Q8NGY0 326 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 RXFP4Q8TDU9 374 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 GTSF1Q8WW33 167 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 SFXN3Q9BWM7 321 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 SLC25A2Q9BXI2 301 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 PECRQ9BY49 303 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 TSGA10Q9BZW7 698 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF696Q9H7X3 374 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 SCRT2Q9NQ03 307 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 FAM49BQ9NUQ9 324 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 ZNF581Q9P0T4 197 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 VPS29Q9UBQ0 182 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 KLK13Q9UKR3 277 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 FBXO5Q9UKT4 447 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 PSG8Q9UQ74 426 aa4.5□□□□□ -1.69
BRCA1-224ENST00000497488 LCTP09848 1927 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 MTCL1Q9Y4B5 1905 aaKnown RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 PSMD12O00232 456 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 TNFSF13O75888 250 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 SERF1AO75920 110 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 CNIH1O95406 144 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 CD5P06127 495 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 CBR1P16152 277 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 CFL1P23528 166 aaKnown RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 RCVRNP35243 200 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 MDH2P40926 338 aaKnown RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 RPL36AP83881 106 aaKnown RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 SKP2Q13309 424 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 KRR1Q13601 381 aaKnown RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 PMVKQ15126 192 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 C6orf99Q4VX62 202 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 FAM162BQ5T6X4 162 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 C1orf195Q5TG92 126 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 TSPO2Q5TGU0 170 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 ARL9Q6T311 187 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 SPNS3Q6ZMD2 512 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 RASSF6Q6ZTQ3 369 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 LRRC25Q8N386 305 aaPredicted RBP4.49□□□□□ -1.69
BRCA1-224ENST00000497488 MUC15Q8N387 334 aa4.49□□□□□ -1.69
BRCA1-224ENST00000497488 OR2D3Q8NGH3 330 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms