RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	TRAPPC6B	Q86SZ2	158 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	MRGPRD	Q8TDS7	321 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	NEK7	Q8TDX7	302 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	CORO2A	Q92828	525 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	KCTD7	Q96MP8	289 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	FUNDC2	Q9BWH2	189 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	MRPS26	Q9BYN8	205 aa	Known RBP	6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	NAA50	Q9GZZ1	169 aa	Known RBP	6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	LIN7B	Q9HAP6	207 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	FBLN5	Q9UBX5	448 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	UBE2J1	Q9Y385	318 aa	Predicted RBP	6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	PEX16	Q9Y5Y5	336 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	SVEP1	Q4LDE5	3571 aa		6.56	□□□□□ -1.36
EFNA1-205	ENST00000497282	TRGV10	A0A0A0MS01	117 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TMEM30CP	A0ZSE6	113 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	UBE2QL1	A1L167	161 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	FUOM	A2VDF0	154 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	FAM172BP	A6NC97	362 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	ZNF729	A6NN14	1252 aa	Predicted RBP	6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NOTO	A8MTQ0	251 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	ODF3B	A8MYP8	253 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NPFF	O15130	113 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SOCS1	O15524	211 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TCF21	O43680	179 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	AIRE	O43918	545 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	IFNA2	P01563	188 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	FUT3	P21217	361 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	CDK2	P24941	298 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	FPR2	P25090	351 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	PAX6	P26367	422 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SSTR5	P35346	364 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	UBE2E1	P51965	193 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TMEM50B	P56557	158 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	HILS1	P60008	231 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NCS1	P62166	190 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	GUCA2A	Q02747	115 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SCGB2A2	Q13296	93 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	MOGAT2	Q3SYC2	334 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TIMM50	Q3ZCQ8	353 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	LDLRAD2	Q5SZI1	272 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NCR3LG1	Q68D85	454 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SFXN4	Q6P4A7	337 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TPRA1	Q86W33	373 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	GAPT	Q8N292	157 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	FAM89B	Q8N5H3	189 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	ZDHHC22	Q8N966	263 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	UBALD1	Q8TB05	177 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	C17orf50	Q8WW18	174 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	AJUBA	Q96IF1	538 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SULT4A1	Q9BR01	284 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SUCNR1	Q9BXA5	334 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	BARHL1	Q9BZE3	327 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NCOR1P1	Q9H4R4	102 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SPACA1	Q9HBV2	294 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	ETAA1	Q9NY74	926 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	TAS2R3	Q9NYW6	316 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	CALY	Q9NYX4	217 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	OR6C3	Q9NZP0	311 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	DAPK2	Q9UIK4	370 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	SESN1	Q9Y6P5	492 aa		6.55	□□□□□ -1.36
EFNA1-205	ENST00000497282	NAV3	Q8IVL0	2385 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	IGHV2-26	A0A0B4J1V2	119 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	KBTBD11-OT1	A0A1B0GTJ5	212 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	MEIOC	A2RUB1	952 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	DNAJC9-AS1	A6NH13	148 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	MCRIP1	C9JLW8	97 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	NPIPB11	E5RHQ5	1161 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	C15orf65	H3BRN8	121 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	GABARAP	O95166	117 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	PAH	P00439	452 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	IL1A	P01583	271 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	MT-ND4	P03905	459 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	SNRPB	P14678	240 aa	Known RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	BLVRB	P30043	206 aa	Predicted RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	VEGFC	P49767	419 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	BPIFB3	P59826	476 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	RBM39	Q14498	530 aa	Known RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	KRTAP21-3	Q3LHN1	58 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	KRTAP24-1	Q3LI83	254 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	PLAC9	Q5JTB6	97 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	OLFML2A	Q68BL7	652 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	ZNF626	Q68DY1	528 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	HEPN1	Q6WQI6	88 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	GDPGP1	Q6ZNW5	385 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	USP43	Q70EL4	1123 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	C5orf24	Q7Z6I8	188 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	LHFPL4	Q7Z7J7	247 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	OR4K15	Q8NH41	348 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	MRPL30	Q8TCC3	161 aa	Known RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	LGALS14	Q8TCE9	139 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	ZNF418	Q8TF45	676 aa	Predicted RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	CCDC107	Q8WV48	283 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	KIRREL1	Q96J84	757 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	DUX5	Q96PT3	197 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	NEDD4L	Q96PU5	975 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	HDHD3	Q9BSH5	251 aa	Predicted RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	URM1	Q9BTM9	101 aa	Known RBP	6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	FAAP24	Q9BTP7	215 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	TMEM133	Q9H2Q1	129 aa		6.54	□□□□□ -1.36
EFNA1-205	ENST00000497282	GAL3ST2	Q9H3Q3	398 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms