RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 EBPLQ9BY08 206 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 CD300AQ9UGN4 299 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 ZNF391Q9UJN7 358 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 CFAP45Q9UL16 551 aa2.03□□□□□ -2.08
SMC4-225ENST00000497203 LRPPRCP42704 1394 aaKnown RBP2.02□□□□□ -2.09
SMC4-225ENST00000497203 A0A0B4J2C4 111 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 LINC00854A0A1B0GVQ3 168 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 A8MWP4 228 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 TMEM250H0YL14 139 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 PHYHO14832 338 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 CYTH3O43739 400 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 SYNGR2O43760 224 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 IGKV1D-33P01593 117 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 IGKV1-33P01594 117 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 GP1BAP07359 652 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 CRABP2P29373 138 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 OR10A3P58181 314 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 CASP8Q14790 479 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 MMDQ15546 238 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 ZNF141Q15928 474 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 BCL2A1Q16548 175 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 FER1L6-AS1Q8NA97 138 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 APOBEC3DQ96AK3 386 aaPredicted RBP2.02□□□□□ -2.09
SMC4-225ENST00000497203 ZNF586Q9NXT0 402 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 MCTS1Q9ULC4 181 aaKnown RBP2.02□□□□□ -2.09
SMC4-225ENST00000497203 TBL2Q9Y4P3 447 aaKnown RBP2.02□□□□□ -2.09
SMC4-225ENST00000497203 GMEB1Q9Y692 573 aa2.02□□□□□ -2.09
SMC4-225ENST00000497203 A0A1W2PNN7 141 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 OR5H14A6NHG9 310 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 LIN7AO14910 233 aaPredicted RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 SLC31A1O15431 190 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 FGF16O43320 207 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CPSF4O95639 269 aaKnown RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 IGHMP01871 453 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 GUSBP08236 651 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 LIMS3P0CW19 117 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 LIMS4P0CW20 117 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 ZNF708P17019 499 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 ZNF3P17036 446 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 COL8A2P25067 703 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 KDELR2P33947 212 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 RCVRNP35243 200 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CD151P48509 253 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 INPP1P49441 399 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 RAB8AP61006 207 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 PAFAH1B3Q15102 231 aaKnown RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 SLC9A3R2Q15599 337 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 ZCWPW2Q504Y3 356 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 PYDC2Q56P42 97 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CLEC6AQ6EIG7 209 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 LAIR2Q6ISS4 152 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CLEC20AQ6ZU45 233 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 MARCH3Q86UD3 253 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 SPATA24Q86W54 205 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 NIT1Q86X76 327 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CRLF3Q8IUI8 442 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 SELENOHQ8IZQ5 122 aaKnown RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 EIF4E3Q8N5X7 224 aaKnown RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 ATP6V1C2Q8NEY4 427 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 OR5AK3PQ8NH89 298 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 CCDC12Q8WUD4 166 aaPredicted RBP2.01□□□□□ -2.09
SMC4-225ENST00000497203 REEP6Q96HR9 211 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 PKMYT1Q99640 499 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 UGT2B28Q9BY64 529 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 BCL2L14Q9BZR8 327 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 DMAC2Q9NW81 257 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 BTRCQ9Y297 605 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 URGCP-MRPS24S4R325 110 aa2.01□□□□□ -2.09
SMC4-225ENST00000497203 EFCAB9A8MZ26 197 aa2□□□□□ -2.09
SMC4-225ENST00000497203 GGTLC3B5MD39 225 aa2□□□□□ -2.09
SMC4-225ENST00000497203 F8VZ95 297 aa2□□□□□ -2.09
SMC4-225ENST00000497203 H3BMM0 161 aa2□□□□□ -2.09
SMC4-225ENST00000497203 POLR3GO15318 223 aaPredicted RBP2□□□□□ -2.09
SMC4-225ENST00000497203 PSCAO43653 123 aa2□□□□□ -2.09
SMC4-225ENST00000497203 CBR3O75828 277 aa2□□□□□ -2.09
SMC4-225ENST00000497203 GYPCP04921 128 aa2□□□□□ -2.09
SMC4-225ENST00000497203 P0C880 135 aa2□□□□□ -2.09
SMC4-225ENST00000497203 GABRA1P14867 456 aa2□□□□□ -2.09
SMC4-225ENST00000497203 S100A2P29034 98 aa2□□□□□ -2.09
SMC4-225ENST00000497203 TGFBR2P37173 567 aa2□□□□□ -2.09
SMC4-225ENST00000497203 MP68P56378 58 aa2□□□□□ -2.09
SMC4-225ENST00000497203 ELP2Q6IA86 826 aa2□□□□□ -2.09
SMC4-225ENST00000497203 DYNC2LI1Q8TCX1 351 aa2□□□□□ -2.09
SMC4-225ENST00000497203 MAL2Q969L2 176 aa2□□□□□ -2.09
SMC4-225ENST00000497203 UBE2WQ96B02 151 aa2□□□□□ -2.09
SMC4-225ENST00000497203 TRNT1Q96Q11 434 aaKnown RBP2□□□□□ -2.09
SMC4-225ENST00000497203 TRIB3Q96RU7 358 aa2□□□□□ -2.09
SMC4-225ENST00000497203 PRSS27Q9BQR3 290 aa2□□□□□ -2.09
SMC4-225ENST00000497203 OR2D2Q9H210 308 aa2□□□□□ -2.09
SMC4-225ENST00000497203 SPACA1Q9HBV2 294 aa2□□□□□ -2.09
SMC4-225ENST00000497203 MS4A12Q9NXJ0 267 aa2□□□□□ -2.09
SMC4-225ENST00000497203 TRBV24-1A0A075B6N3 115 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 TMEM213A2RRL7 107 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 ARGFXA6NJG6 315 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 TRPC5OSA6NMA1 111 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 MKRN2OSH3BPM6 223 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 SCN2BO60939 215 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 CGB3P0DN86 165 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 CGB7P0DN87 165 aa1.99□□□□□ -2.09
SMC4-225ENST00000497203 ACTR1BP42025 376 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms