RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 OPN4Q9UHM6 478 aa7.12□□□□□ -1.27
USP54-215ENST00000497106 C5orf63A6NC05 138 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ZNF503-AS2A6NEH8 195 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 OR2AT4A6NND4 320 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 GPR137BO60478 399 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ARHGDIBP52566 201 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 STX12Q86Y82 276 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 LINC00518Q8N0U6 118 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 RTN4IP1Q8WWV3 396 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 WFIKKN1Q96NZ8 548 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 MRPL37Q9BZE1 423 aaKnown RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 ENY2Q9NPA8 101 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ZNF230Q9UIE0 474 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 SESN1Q9Y6P5 492 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 BDP1A6H8Y1 2624 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 DUXBA0A1W2PPF3 345 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 RFPL4AA6NLU0 287 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 RFPL4AL1F8VTS6 287 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 PHF1O43189 567 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 RP2O75695 350 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 LY86O95711 162 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 PIGPP57054 158 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 RPP30P78346 268 aaKnown RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 RPRMLQ8N4K4 120 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TCTEX1D1Q8N7M0 179 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 DEFB108BQ8NET1 73 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 OR8B3Q8NGG8 313 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 LINC01560Q8TB33 94 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 CD300LFQ8TDQ1 290 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 OR8B2Q96RD0 313 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 PTPRBP23467 1997 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TRBV6-6A0A0A6YYG2 114 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ATXN7O15265 892 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 MED6O75586 246 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 GPR12P47775 334 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 NPBWR2P48146 333 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TMEM50BP56557 158 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ATPAF1Q5TC12 328 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 CCL17Q92583 94 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ADTRPQ96IZ2 230 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 LURAP1Q96LR2 239 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 S1PR3Q99500 378 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TRAF4Q9BUZ4 470 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 NAA60Q9H7X0 242 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 SEBOXQ9HB31 216 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 FLVCR2Q9UPI3 526 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 IGLV3-9A0A075B6K5 115 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 IGKV1-27A0A075B6S5 117 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 A0A0D9SG52 128 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TOR1AO14656 332 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 SCGB1D2O95969 90 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 NKX2-5P52952 324 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 RELQ04864 619 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 ZNF146Q15072 292 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 SSC4DQ8WTU2 575 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 TMEM171Q8WVE6 324 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 ZNF488Q96MN9 340 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 BARX1Q9HBU1 254 aaPredicted RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 OR2S2Q9NQN1 319 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 CBLN4Q9NTU7 201 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 JKAMPQ9P055 326 aa7.11□□□□□ -1.27
USP54-215ENST00000497106 RCC2Q9P258 522 aaKnown RBP7.11□□□□□ -1.27
USP54-215ENST00000497106 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 BORCS7-ASMTA0A0B4J1R7 106 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 IGHV3-64DA0A0J9YX35 117 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 A8MV72 311 aaPredicted RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 HMGB3O15347 200 aaKnown RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 ST8SIA5O15466 376 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 PPYP01298 95 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 GATA4P43694 442 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 NKX6-1P78426 367 aaPredicted RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 WDR82Q6UXN9 313 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 Q6ZS49 121 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 Q8NFD4 153 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 GHITMQ9H3K2 345 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 OR2W1Q9Y3N9 320 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 HSPB11Q9Y547 144 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 GVINP1Q7Z2Y8 2422 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 EML6Q6ZMW3 1958 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 C9orf170A2RU37 121 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 PLA2G7Q13093 441 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 MEX3BQ6ZN04 569 aaKnown RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 OVCH2Q7RTZ1 564 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 OR1S1Q8NH92 325 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 SLC25A31Q9H0C2 315 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 RANGRFQ9HD47 186 aaPredicted RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 TMED3Q9Y3Q3 217 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 ACACAQ13085 2346 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 MED19A0JLT2 244 aaPredicted RBP7.1□□□□□ -1.27
USP54-215ENST00000497106 NKX2-6A6NCS4 301 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 HSD17B6O14756 317 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 ADAM20O43506 726 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 COX6B1P14854 86 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 CD80P33681 288 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 DHRS2Q13268 280 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 PDCD1Q15116 288 aa7.1□□□□□ -1.27
USP54-215ENST00000497106 MOB3AQ96BX8 217 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms