RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 EXOSC4Q9NPD3 245 aaKnown RBP11.64□□□□□ -0.55
CXCL12-208ENST00000496375 PCDHB16Q9NRJ7 776 aa11.64□□□□□ -0.55
CXCL12-208ENST00000496375 PTTG2Q9NZH5 202 aa11.64□□□□□ -0.55
CXCL12-208ENST00000496375 CCDC160A6NGH7 325 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 ZNF701M0R085 212 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 SLC22A1O15245 554 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 PSPNO60542 156 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 CDRT1O95170 752 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 OR2H2O95918 312 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 UBBP0CG47 229 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 VSIG10L2P0DP72 767 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 JUNBP17275 347 aaPredicted RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 ERP29P30040 261 aaKnown RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 OR3A1P47881 315 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 RBM11P57052 281 aaKnown RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 GLT8D1Q68CQ7 371 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 GPR141Q7Z602 305 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 OSR2Q8N2R0 312 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 JAGN1Q8N5M9 183 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 ASCC1Q8N9N2 400 aaKnown RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 CFHR4Q92496 578 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 GSTK1Q9Y2Q3 226 aa11.63□□□□□ -0.55
CXCL12-208ENST00000496375 MRPS28Q9Y2Q9 187 aaKnown RBP11.63□□□□□ -0.55
CXCL12-208ENST00000496375 MEX3AA1L020 520 aaKnown RBP11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A10PA6NDY2 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A18PA6NE21 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A16PA6NEW6 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A20PA6NIJ5 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A8PA6NJQ4 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A7PA6NKC0 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 C17orf98A8MV24 154 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A22PA8MWA6 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A12PA8MX19 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A5PA8MXJ8 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A23PA8MXZ1 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 G3V4G9 280 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 SLC33A1O00400 549 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-208ENST00000496375 MGST3O14880 152 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A15PP0C7V4 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A13PP0C7W8 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A14PP0C7W9 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 FAM90A24PP0C7X0 464 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 DUSP1P28562 367 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 DLX6P56179 175 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
CXCL12-208ENST00000496375 MPV17LQ2QL34 196 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 PLA1AQ53H76 456 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 GLIPR1L1Q6UWM5 242 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 DYNAPQ8N1N2 210 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 OR4S1Q8NGB4 309 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 OR10K1Q8NGX5 313 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 S100A13Q99584 98 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 NCOR1P1Q9H4R4 102 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 RSL24D1Q9UHA3 163 aaKnown RBP11.62□□□□□ -0.55
CXCL12-208ENST00000496375 STUB1Q9UNE7 303 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
CXCL12-208ENST00000496375 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 SLC17A2O00624 439 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 PLXNB1O43157 2135 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 HTR3BO95264 441 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 RBP4P02753 201 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 OPN1MWP04001 364 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 CSTBP04080 98 aaKnown RBP11.61□□□□□ -0.55
CXCL12-208ENST00000496375 ARG1P05089 322 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 OPN1MW2P0DN77 364 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 OPN1MW3P0DN78 364 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 CALCBP10092 127 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 GTF2F2P13984 249 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 CALRP27797 417 aaKnown RBP11.61□□□□□ -0.55
CXCL12-208ENST00000496375 KCNJ3P48549 501 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 RAB13P51153 203 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 PSMD7P51665 324 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 EDDM3BP56851 147 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 DYNC1I2Q13409 638 aaKnown RBP11.61□□□□□ -0.55
CXCL12-208ENST00000496375 LSAMPQ13449 338 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 NEDD8Q15843 81 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 FAM189A2Q15884 450 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 PIGYQ3MUY2 71 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 AWAT2Q6E213 333 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 TCF23Q7RTU1 214 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 DTX3Q8N9I9 347 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 OR13D1Q8NGV5 346 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 Q96M66 194 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 ZNF702PQ9H963 129 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 RCC2Q9P258 522 aaKnown RBP11.61□□□□□ -0.55
CXCL12-208ENST00000496375 ING4Q9UNL4 249 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 ST3GAL6Q9Y274 331 aa11.61□□□□□ -0.55
CXCL12-208ENST00000496375 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 A0A1W2PP11 408 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 ODF3BA8MYP8 253 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 SIRPB1O00241 398 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 ZNF728P0DKX0 622 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 ZNF44P15621 663 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 SERPINA2P20848 420 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 HTR2CP28335 458 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 SNU13P55769 128 aaKnown RBP11.6□□□□□ -0.55
CXCL12-208ENST00000496375 P2RX3P56373 397 aa11.6□□□□□ -0.55
CXCL12-208ENST00000496375 QRFPP83859 136 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms