RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PCP4P48539 62 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 MFAP4P55083 255 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF793Q6ZN11 406 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 KLHDC9Q8NEP7 349 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 NUBPLQ8TB37 319 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 PATE1Q8WXA2 126 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 HDHD3Q9BSH5 251 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 PLA2G3Q9NZ20 509 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 IGKV3D-15A0A087WSY6 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 SHISA8B8ZZ34 492 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 KCNAB3O43448 404 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 IGKV3-15P01624 115 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 OR10D3Q8NH80 312 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 LINC00470Q9BZP3 86 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 VCX2Q9H322 139 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GPR35Q9HC97 309 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 F11RQ9Y624 299 aaKnown RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 MROH1Q8NDA8 1641 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 C17orf51A8MQB3 221 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 KLK10O43240 276 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GZMHP20718 246 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 VEGFBP49765 207 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF117Q03924 483 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 FMODQ06828 376 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 FAM109BQ6ICB4 259 aaPredicted RBP6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GAPTQ8N292 157 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GALNT14Q96FL9 552 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 MRGPRX3Q96LB0 322 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 GLRX2Q9NS18 164 aa6.94□□□□□ -1.3
BRCA1-221ENST00000493795 A0A0A6YYD5 115 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 C9orf172C9J069 976 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ADAP1O75689 374 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 GABRG2P18507 467 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 CCL7P80098 99 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 STPG3Q8N7X2 389 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 RND1Q92730 232 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PSMG3Q9BT73 122 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-221ENST00000493795 RNF7Q9UBF6 113 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 HSPB7Q9UBY9 170 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 NEU3Q9UQ49 428 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PITX3O75364 302 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ALKAL1Q6UXT8 129 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SOSTQ9BQB4 213 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SCNM1Q9BWG6 230 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 HLA-DRB1P01911 266 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 FOLR2P14207 255 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SELENOPP49908 381 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ARF6P62330 175 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SLC35B1P78383 322 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 RELQ04864 619 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SGMS2Q8NHU3 365 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ARRDC1-AS1Q9H2J1 176 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 IGHV3OR16-12A0A075B7B8 117 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 IGKV3D-11A0A0A0MRZ8 115 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 C7orf71A4D174 169 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ZBTB42B2RXF5 422 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 CTDSPLO15194 276 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 SYNGR1O43759 233 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 CYB5R3P00387 301 aaPredicted RBP6.93□□□□□ -1.3
BRCA1-221ENST00000493795 GHRHP01286 108 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 HLA-DQA1P01909 254 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 IGKV3-11P04433 115 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PCMT1P22061 227 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 TNFSF10P50591 281 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 IBA57Q5T440 356 aaKnown RBP6.93□□□□□ -1.3
BRCA1-221ENST00000493795 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 OR10AC1Q8NH08 325 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 MZB1Q8WU39 189 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PTP4A1Q93096 173 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 ABHD14BQ96IU4 210 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 FOXC2Q99958 501 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 PHLDA3Q9Y5J5 127 aa6.93□□□□□ -1.3
BRCA1-221ENST00000493795 GFERP55789 205 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RAC3P60763 192 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 RPS4XP62701 263 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 NAAAQ02083 359 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MDP1Q86V88 176 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ZG16BQ96DA0 208 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 GMPPAQ96IJ6 420 aaPredicted RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 WNT5BQ9H1J7 359 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 HCSTQ9UBK5 93 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 SIGLEC7Q9Y286 467 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 LILRA5A6NI73 299 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 NPFFO15130 113 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 ABLIM3O94929 683 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CDKN2AP42771 156 aaKnown RBP6.92□□□□□ -1.3
BRCA1-221ENST00000493795 CRYBB2P43320 205 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TFPI2P48307 235 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 MMDQ15546 238 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 TSPO2Q5TGU0 170 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 C10orf35Q96D05 121 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 GPR82Q96P67 336 aa6.92□□□□□ -1.3
BRCA1-221ENST00000493795 PHF7Q9BWX1 381 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms