RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PLPP3O14495 311 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 MYO1DO94832 1006 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 STAG3L2P0CL84 134 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 ARR3P36575 388 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 KRTCAP2Q8N6L1 136 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 ZIC4Q8N9L1 334 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 OR51L1Q8NGJ5 315 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 TOP1MTQ969P6 601 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 FMC1Q96HJ9 113 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 BCL7BQ9BQE9 202 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 TSSK6Q9BXA6 273 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 FBXO44Q9H4M3 255 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 POMKQ9H5K3 350 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 TDRD3Q9H7E2 651 aaKnown RBP1.08□□□□□ -2.24
ITGB1-216ENST00000493758 ACOT13Q9NPJ3 140 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 SMARCA2P51531 1590 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 WDFY4Q6ZS81 3184 aa1.08□□□□□ -2.24
ITGB1-216ENST00000493758 TOP2BQ02880 1626 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 NHSL1Q5SYE7 1610 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 ALKQ9UM73 1620 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 REV3LO60673 3130 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 XIRP2A4UGR9 3374 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 PTPRMP28827 1452 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 SHANK3Q9BYB0 1731 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 A0A1W2PQL4 384 aaPredicted RBP1.07□□□□□ -2.24
ITGB1-216ENST00000493758 RBFOX3A6NFN3 312 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 ERICH4A6NGS2 130 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 TMEM250H0YL14 139 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 PRMT5O14744 637 aaPredicted RBP1.07□□□□□ -2.24
ITGB1-216ENST00000493758 GMDSO60547 372 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 OTCP00480 354 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 LIPCP11150 499 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 GCLMP48507 274 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 TTPAP49638 278 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 NKAIN1Q4KMZ8 207 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 OR13C9Q8NGT0 318 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 HIST1H2BAQ96A08 127 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 REEP6Q96HR9 211 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 SLC19A3Q9BZV2 496 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 GAL3ST2Q9H3Q3 398 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 VCX3AQ9NNX9 186 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 URGCP-MRPS24S4R325 110 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 ANKRD17O75179 2603 aaKnown RBP1.07□□□□□ -2.24
ITGB1-216ENST00000493758 UBR4Q5T4S7 5183 aa1.07□□□□□ -2.24
ITGB1-216ENST00000493758 CACNA1BQ00975 2339 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 BDP1A6H8Y1 2624 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 FLNBO75369 2602 aaKnown RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 SLIT2O94813 1529 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 LOC102725191A0A1B0GVB3 256 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 ZNF860A6NHJ4 632 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 KLRC4-KLRK1H3BQV0 150 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 H3BRN7 92 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 ZNF189O75820 626 aaPredicted RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 RAB36O95755 333 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 CA2P00918 260 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 CRYGCP07315 174 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 M6PRP20645 277 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 PTNP21246 168 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 DEKP35659 375 aaKnown RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 C2orf80Q0P641 193 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 HNRNPA1L2Q32P51 320 aaKnown RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 NDUFAF6Q330K2 333 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 NIPAL1Q6NVV3 410 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 SLC25A45Q8N413 288 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 PDCL2Q8N4E4 241 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 C2orf73Q8N5S3 287 aaPredicted RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 ASCC1Q8N9N2 400 aaKnown RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 OR52K1Q8NGK4 314 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 OR4A15Q8NGL6 344 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 OR4A5Q8NH83 315 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 MITD1Q8WV92 249 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 KCTD4Q8WVF5 259 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 TM6SF2Q9BZW4 377 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 VAPAQ9P0L0 249 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 PHLDA3Q9Y5J5 127 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 BZW2Q9Y6E2 419 aaKnown RBP1.06□□□□□ -2.24
ITGB1-216ENST00000493758 V9GYY9 64 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 MIA3Q5JRA6 1907 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 ADAMTSL3P82987 1691 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 ADAMTS7Q9UKP4 1686 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 CHD1O14646 1710 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 COL4A2P08572 1712 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 KIF27Q86VH2 1401 aa1.06□□□□□ -2.24
ITGB1-216ENST00000493758 BCL9LQ86UU0 1499 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 ITPR3Q14573 2671 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 PPRC1Q5VV67 1664 aaKnown RBP1.05□□□□□ -2.24
ITGB1-216ENST00000493758 FASNP49327 2511 aaKnown RBP1.05□□□□□ -2.24
ITGB1-216ENST00000493758 PIEZO1Q92508 2521 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 TRAV8-3A0A0A6YYJ7 113 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 E7EWF7 191 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 KDELR3O43731 214 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 CSTAP01040 98 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 CPN2P22792 545 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 NUP62P37198 522 aaPredicted RBP1.05□□□□□ -2.24
ITGB1-216ENST00000493758 XKP51811 444 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 OR8G1Q15617 311 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 C6orf183Q5T699 404 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 FAM19A1Q7Z5A9 133 aa1.05□□□□□ -2.24
ITGB1-216ENST00000493758 FAM58AQ8N1B3 248 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms