RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 ZNF596Q8TC21 504 aa12.9□□□□□ -0.34
PKP4-214ENST00000492496 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
PKP4-214ENST00000492496 LINC00574Q9H8X3 128 aa12.9□□□□□ -0.34
PKP4-214ENST00000492496 SPACA1Q9HBV2 294 aa12.9□□□□□ -0.34
PKP4-214ENST00000492496 ZNF581Q9P0T4 197 aa12.9□□□□□ -0.34
PKP4-214ENST00000492496 ANK2Q01484 3957 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A22PA8MWA6 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 UCHL1P09936 223 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 UBBP0CG47 229 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 SRMP19623 302 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 PSMA1P25786 263 aaKnown RBP12.89□□□□□ -0.35
PKP4-214ENST00000492496 PAX6P26367 422 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 HTR1DP28221 377 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 GDNFP39905 211 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 GLP1RP43220 463 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM189A2Q15884 450 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 SSX2Q16385 188 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 HSD17B12Q53GQ0 312 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 ATAD3CQ5T2N8 411 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 FAM27D1Q5T7N8 215 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 GLT8D1Q68CQ7 371 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 LRRTM1Q86UE6 522 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 OR10A7Q8NGE5 316 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 OR13A1Q8NGR1 328 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 LINC01006Q8NI28 216 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 NDNFQ8TB73 568 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 MGLLQ99685 303 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 Q9H521 79 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 ABCB10Q9NRK6 738 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 CALYQ9NYX4 217 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 RCC2Q9P258 522 aaKnown RBP12.89□□□□□ -0.35
PKP4-214ENST00000492496 RNF114Q9Y508 228 aa12.89□□□□□ -0.35
PKP4-214ENST00000492496 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 H3BUI4 141 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
PKP4-214ENST00000492496 IGLV1-47P01700 117 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 CD37P11049 281 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 MGMTP16455 207 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 GZMHP20718 246 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 MAP2K4P45985 399 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 PRRX1P54821 245 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
PKP4-214ENST00000492496 LY6EQ16553 131 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 C1orf100Q5SVJ3 147 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 CREB3L1Q96BA8 519 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 KIRREL1Q96J84 757 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 IDI2-AS1Q9NZ38 188 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 DPM3Q9P2X0 92 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 PITPNC1Q9UKF7 332 aa12.88□□□□□ -0.35
PKP4-214ENST00000492496 MCRIP1C9JLW8 97 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 NPIPB11E5RHQ5 1161 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 TOR1AO14656 332 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 DENRO43583 198 aaKnown RBP12.87□□□□□ -0.35
PKP4-214ENST00000492496 CRTAPO75718 401 aaPredicted RBP12.87□□□□□ -0.35
PKP4-214ENST00000492496 IL1AP01583 271 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 GLAP06280 429 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 PROK1P58294 105 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
PKP4-214ENST00000492496 HLA-DRB5Q30154 266 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 TMEM91Q6ZNR0 172 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 ZNF367Q7RTV3 350 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 DTX3Q8N9I9 347 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 MRGPRDQ8TDS7 321 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 TMEM203Q969S6 136 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 Q96M66 194 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 SELENOIQ9C0D9 397 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 CST11Q9H112 138 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 BANF2Q9H503 90 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 RANBP3Q9H6Z4 567 aaPredicted RBP12.87□□□□□ -0.35
PKP4-214ENST00000492496 ZNF286AQ9HBT8 521 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 HILPDAQ9Y5L2 63 aa12.87□□□□□ -0.35
PKP4-214ENST00000492496 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 LEUTXA8MZ59 168 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 ARL6IP5O75915 188 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 NFYBP25208 207 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 GABRA5P31644 462 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 CEACAM3P40198 252 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 PLA1AQ53H76 456 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 ZNF497Q6ZNH5 498 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 SLC16A12Q6ZSM3 486 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 TMEM104Q8NE00 496 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 OR9G1Q8NH87 305 aa12.86□□□□□ -0.35
PKP4-214ENST00000492496 NEK7Q8TDX7 302 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms