RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 MCRIP1C9JLW8 97 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 H3BUI4 141 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CLDN34H7C241 214 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MMP23AO75900 390 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 PAHP00439 452 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MELTFP08582 738 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ARSBP15848 533 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CDK2P24941 298 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RPS27AP62979 156 aaKnown RBP13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 QRFPP83859 136 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 UNC119Q13432 240 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RBM39Q14498 530 aaKnown RBP13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SLC9A3R2Q15599 337 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RAB12Q6IQ22 244 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 HEPN1Q6WQI6 88 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR2W3Q7Z3T1 314 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNF565Q8N9K5 539 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR13A1Q8NGR1 328 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FAM216AQ8WUB2 273 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR51E2Q9H255 320 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TMEM133Q9H2Q1 129 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 STEAP1Q9UHE8 339 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 PEX16Q9Y5Y5 336 aa13.26□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ODF3BA8MYP8 253 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 PDCD6O75340 191 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ARG1P05089 322 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CD36P16671 472 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RAB3BP20337 219 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FUT3P21217 361 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LGALS4P56470 323 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CLDN12P56749 244 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR10A3P58181 314 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C17orf58Q2M2W7 97 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 HES5Q5TA89 166 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNF626Q68DY1 528 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SIGIRRQ6IA17 410 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR52W1Q6IF63 320 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TMEM86BQ8N661 226 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR11H6Q8NGC7 330 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MRGPRDQ8TDS7 321 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SSMEM1Q8WWF3 244 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TM2D1Q9BX74 207 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ETAA1Q9NY74 926 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CALYQ9NYX4 217 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNRD1Q9P1U0 126 aa13.25□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IGHV2-26A0A0B4J1V2 119 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 KBTBD11-OT1A0A1B0GTJ5 212 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 GLAP06280 429 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CGB3P0DN86 165 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CGB7P0DN87 165 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 OMGP23515 440 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 GADD45AP24522 165 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 GDNFP39905 211 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ACTG1P63261 375 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 DYNC1I2Q13409 638 aaKnown RBP13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 ZNF497Q6ZNH5 498 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C17orf50Q8WW18 174 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NEDD4LQ96PU5 975 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CHCHD6Q9BRQ6 235 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NICN1Q9BSH3 213 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 URM1Q9BTM9 101 aaKnown RBP13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CLEC7AQ9BXN2 247 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TBL2Q9Y4P3 447 aaKnown RBP13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 POMT1Q9Y6A1 747 aa13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FBN1P35555 2871 aaKnown RBP13.24□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TRIM64CA6NLI5 447 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IFITM5A6NNB3 132 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 AIPO00170 330 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IL1AP01583 271 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IGHV4-59P01825 116 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CFPP27918 469 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CHATP28329 748 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 NKAPLQ5M9Q1 402 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 BAIAP2L2Q6UXY1 529 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 BEND2Q8NDZ0 799 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 AJUBAQ96IF1 538 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 KCTD7Q96MP8 289 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LPAR5Q9H1C0 372 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 DPAGT1Q9H3H5 408 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IDI2-AS1Q9NZ38 188 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 A0A0A6YYD4 124 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 TRAV39A0A0B4J263 110 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 UBE2QL1A1L167 161 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 FAM172BPA6NC97 362 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CA11O75493 328 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 MT-ND4P03905 459 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 JUNBP17275 347 aaPredicted RBP13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 CD34P28906 385 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 SSTR5P35346 364 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 IER3P46695 156 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 C2orf76Q3KRA6 126 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 LHFPL4Q7Z7J7 247 aa13.22□□□□□ -0.29
MSH5-SAPCD1-206ENST00000491552 RTN4RL2Q86UN3 420 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms